Sequence of DPV Beet ringspot virus
Beet ringspot virus gene for polyprotein, strain S, genomic RNA-2
ACC No: X04062
Dated: 2002-04-10 | Length: 4662 | CRC: -1751761823
!!NA_SEQUENCE 1.0
ID NETBRVR2 standard; RNA; VRL; 4662 BP.
XX
AC X04062;
XX
SV X04062.1
XX
DT 18-NOV-1986 (Rel. 10, Created)
DT 10-APR-2002 (Rel. 71, Last updated, Version 3)
XX
DE Beet ringspot virus gene for polyprotein, strain S, genomic RNA-2
XX
KW polyprotein.
XX
OS Beet ringspot virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC Nepovirus; Subgroup B.
XX
RN [1]
RP 1-4662
RA Meyer M., Hemmer O., Mayo M.A., Fritsch C.;
RT "The Nucleotide Sequence of Tomato Black Ring Virus RNA-2";
RL J. Gen. Virol. 67:1257-1271(1986).
XX
DR SWISS-PROT; P14547; POL2_TBRVS.
XX
CC Data kindly reviewed (29-SEP-1986) by C. Fritsch
XX
CC X04062 and D00322 are the ICTV7 genome sequence accession numbers for
CC Beet ringspot virus
XX
FH Key Location/Qualifiers
FH
FT source 1. .4662
FT /db_xref="taxon:191547"
FT /organism="Beet ringspot virus"
FT /strain="S"
FT CDS 288. .4361
FT /db_xref="SWISS-PROT:P14547"
FT /note="150 k protein (1357 aa)"
FT /product="polyprotein"
FT /protein_id="CAA27694.1"
FT /translation="MGFRELFASSLGDAARAKASLVRGMSGWLNTTLATVQAAGPEIRA
FT CAYSALWAEVDSVKELVPLSATMLLNQLRADLKCAQVRAQKCTPASTSRFCSCGGIPLP
FT GENKWEDELVPIPDCPVGRNFCRDGVFCKRHHGPGETLERVQVLVEAPKCPHCQGTGII
FT PRSEPMAYIRSEYERQTKTFARPSNPLHEWILEEGRESNHARRCSNWYHMSMSQIDKRD
FT NDPCDASTWMAAAQILFDNADAQVYYPGSNYRKLVGGSKGYDDWCQLPPSKEMCNRLFD
FT WWHRQNTPDYYVSEDTLADFVKPRMGSCHLPIEHDVHLLPREWHGRVSAGNTSHFMACL
FT DGLSSSMEEFLDVFYDCAAQFNGDIEIFLDTNEKPSRVVGNLGGVRVLLTTPAVCSPAK
FT LLPEIEESDFDQLEDESISCDSMIPPLFRDNGLSALYANLVLKQATVQSILMAHPDQDE
FT IEDQVDHLENKQGGEIVTTPAFIKMLKEKRKEVRGKEFAEGSEGRLVRASDLTLSREDV
FT FLSGGLFEKFRKSGIVQTFKGKDPKLTKVCVDLTNSQEIIKYPSKEMCSDSSGVHTGQV
FT FTVLNRPLYNELNKLAESGWKEAKSVCLNLHIRSYVPVHTPLYAFCVIMWGHSSDAETA
FT SLCGAGVYLGDQEAAVLELPLVCSYLGNSLEDFDAYKRSLVLSTVFFGKSGLFAGQNVF
FT GITAVEFTEYMPTSYGGITHERDSWQAMLRNHQGKDKGRFIAGFNVVDALERDKEEPIK
FT MPNLDLEPVPRTQPIVRTFTGEGKQPLLNKSRSMRIQSFVSFRGSNIPVGRRIDNTAEA
FT INYELGRASTSSVSSRLDESKCNLKAGGSYAFGETIELPATVTPGTVLAVFNIFDKIQE
FT TNTKVCSKWLEQGYVSQNLTAISHLAPNAFSGIAIWYIFDAYGKIPGDVTTTFELEMAR
FT SFDPHVQVLRDVSTSTWVIDFHKICGQTLNFSGQGYCVPKIWVIAASTFQLARSTATKF
FT RLEFYTRGEKLVRGLAEQPLSYPIEARHLTDLNLMLAPKQIAVGTYAMITFPVSLAAKL
FT QSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRIALWGTVPETDQLAQM
FT PHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKGI
FT EANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFVNALAI
FT LCATTGMHHGNCTIHFSWLWHPAELGKQLGRLKFVQGMGINNEHIGDTMCYNSLSNTHS
FT VPFQFGSFAGPITSGGKADEAENWIEIQSPDFSWVASLHVSIEVHEGFKFYGRSAGPLT
FT IPATVADVSAVSGS"
FT unsure 1609
FT /note="U may be C"
FT unsure 2168
FT /note="U may be C"
FT unsure 2350
FT /note="U may be C"
FT unsure 3332
FT /note="U may be C"
FT unsure 3609
FT /note="U may be C"
FT unsure 3873
FT /note="A may be G"
XX
SQ Sequence 4662 BP; 1162 A; 985 C; 1116 G; 1399 T; 0 other;
X04062 Length: 4662 April 23, 2002 09:20 Type: N Check: 3513 ..
1 ttgaaaataa attttcaaat ttttactttg tgtaattcct ctgctttcta
51 tcgaagtcaa ggtaacgcct tgcaccaact tgtctgcaac acttccacaa
101 ccatatttgc aaatttcttt tcttctgcat tgctgcggta atacagcgtt
151 gatttctttt gaaatcaaac caagtcttaa cttggtgtgc atctttcttt
201 tctttcgaag tgtaggatag cgcctaccac tcgattattg ggatagcgcc
251 caatacaatt taattttctt ttatcttgtt gcccactatg ggctttcggg
301 agctttttgc ttcttcactc ggggatgctg cccgagctaa ggcttccctt
351 gtcaggggga tgtctgggtg gttaaatacc accttagcta ctgtccaggc
401 tgccggacct gaaatccggg cttgtgcata ctctgccctt tgggctgagg
451 ttgactccgt taaggagttg gtgccgcttt ctgcgactat gctactgaat
501 cagctgcgtg ctgatcttaa atgtgcacag gtgcgtgccc aaaaatgcac
551 ccctgcatcc accagcaggt tctgctcttg tggtggtatc cctctcccgg
601 gagaaaataa atgggaggac gaacttgtgc ccattccgga ttgtccggtt
651 ggacgcaatt tctgccgtga tggtgttttt tgtaagcgcc atcatggtcc
701 tggagagact ctagagagag tccaagtgct tgtggaagca ccaaagtgtc
751 cacactgcca ggggacagga ataatcccta ggagtgagcc tatggcttat
801 atccgttctg aatacgagcg ccaaactaag accttcgctc gtccaagcaa
851 tccactacat gagtggattc ttgaagaggg ccgtgagagc aaccacgcac
901 gtcgttgctc aaactggtat cacatgtcga tgtcccaaat tgataaacgg
951 gacaatgatc catgtgatgc ttccacctgg atggctgctg cgcaaatttt
1001 atttgataat gctgatgcgc aggtctatta cccaggttcc aactaccgta
1051 aattggtggg tggttctaag ggttatgacg actggtgcca actaccacca
1101 tccaaggaaa tgtgcaaccg gctttttgac tggtggcaca gacagaacac
1151 gccggactat tatgtatcgg aagatactct ggctgacttt gttaagccac
1201 gcatggggtc atgtcatcta ccaattgaac atgatgtgca tttgctaccc
1251 cgtgaatggc atggcagggt ttctgcaggg aacacttccc attttatggc
1301 gtgccttgat ggtcttagtt cctcaatgga ggaatttctt gatgttttct
1351 atgactgtgc tgcacagttc aatggagata tcgagatatt tcttgatact
1401 aatgagaaac catcaagagt ggttggaaat ctcggtggag tccgagtctt
1451 gttgacaact cccgcagttt gttcgcctgc gaaactccta cctgaaattg
1501 aggagagtga ctttgaccaa ttggaggatg aatctatatc ttgtgattct
1551 atgatacctc ctttgtttag agacaatggc ctatctgctt tatatgccaa
1601 tttggttttg aaacaggcca ctgtacagtc catcttgatg gcccacccag
1651 atcaagatga gattgaagac caggtggacc accttgaaaa taaacaaggt
1701 ggtgaaattg tgaccactcc cgcctttatc aaaatgctga aggaaaaacg
1751 caaggaggtg cggggaaagg agtttgctga gggttcagag ggccgacttg
1801 ttcgcgcttc tgatcttact ctcagtaggg aagatgtttt tctctctgga
1851 ggactttttg aaaagttccg aaagagtggg atcgtccaaa ccttcaaggg
1901 caaggatcca aagcttacca aggtttgtgt ggatttgacc aattctcagg
1951 aaattatcaa gtacccctcg aaagagatgt gctctgatag ttctggtgtc
2001 cacacaggcc aagtgttcac tgtgctcaac cgccctctct acaacgaatt
2051 gaataaactt gctgaaagcg gttggaagga ggcaaaatct gtttgcctta
2101 acttacacat tcggagctat gtgcccgtgc acacacccct gtatgccttc
2151 tgtgttatta tgtggggtca tagttctgat gctgagaccg catcactctg
2201 cggcgctggt gtctatttgg gagaccaaga ggctgcagtg ttggagctgc
2251 cattggtttg tagttacctc gggaattctc tagaggactt tgatgcatat
2301 aagcgtagct tggtgctatc aacggtgttc ttcggaaaat ccggtttgtt
2351 tgcaggccaa aatgtttttg gaatcaccgc tgtggaattc actgaatata
2401 tgccaacttc ttatggtggc ataacacatg agcgggattc ctggcaggcg
2451 atgctgagga accaccaggg caaagacaag ggtcgattca ttgctggatt
2501 caatgttgtt gatgctctgg agagagataa ggaggaacca atcaagatgc
2551 ccaatcttga tctcgagccg gttccgcgca cacaacctat tgtgcgcacg
2601 ttcacgggtg aagggaaaca accccttcta aataaaagtc gcagtatgcg
2651 tatacagagt tttgtttcct ttcggggtag caacattccc gttggaagac
2701 ggattgacaa tactgctgag gctataaatt atgagctagg acgagcctct
2751 actagcagcg tgagttcccg tctggatgaa tccaaatgta atcttaaggc
2801 cggagggagc tacgcctttg gagagaccat tgagttgccc gccactgtca
2851 cacctggaac agttctagcc gttttcaata tctttgataa gatacaggaa
2901 acgaatacaa aggtgtgttc caagtggctg gaacaagggt atgttagtca
2951 aaatttgact gccatatctc atctggctcc caatgctttt agtgggattg
3001 ccatctggta tatttttgat gcctacggta agattccagg tgatgtgacc
3051 accacttttg agcttgaaat ggcacggagt ttcgatccac atgttcaagt
3101 tttacgtgat gtcagtacct ccacgtgggt tattgacttc cataagatat
3151 gtggacagac actcaatttt tccggacagg gatattgtgt gccaaaaata
3201 tgggttatcg cggcctctac ttttcaatta gcacgatcca cggctacgaa
3251 attccgtttg gaattttata cccgtgggga aaaactagtg aggggtttgg
3301 ctgagcagcc cttgtcatat cctattgagg ctaggcatct tacagatcta
3351 aatctgatgc tggccccaaa acaaattgct gttgggactt atgcaatgat
3401 aacatttcca gtatccctag cagcaaaact gcaatcaact tctggtagaa
3451 ccgcttattc ttatgcggct ggtttgttgt cccatttttt gggagtgggc
3501 ggtacaattc attttgtggt gcgtactact tctagtgctt ttgttactag
3551 taagttgcgt attgctctat ggggtacagt acccgagaca gatcagcttg
3601 cacagatgcc gcatgttgat gtagaagtga atgttgatgc aagcctgcag
3651 atacaatctc ccttcttctc aactgctaat tttggaaata gcggatcggc
3701 cttttatgtg tcgactctat gtgcacccat ggcaccagag acagtagaaa
3751 ccggatctga gtattacatt cagatcaaag gtattgaggc gaatcctggt
3801 ttatgtcgtg agattaatta taaacagcga tttgcctggt gtcttctgga
3851 gtgtttggat aactccaaag cgagtcctat aaaggttaag ataccttctc
3901 gtataggcaa tctttcatcc aaacatgtga aagtcaccaa ttttgttaat
3951 gctcttgcta tattgtgtgc tactactggg atgcaccatg gaaattgtac
4001 catacatttt tcgtggttgt ggcatcccgc tgaacttggc aagcaattgg
4051 ggcggttgaa gtttgtccag ggaatgggta ttaataatga acacattggt
4101 gataccatgt gttacaattc tctgagtaac acccattctg ttccttttca
4151 atttggatcc tttgctggac cgatcacttc tgggggaaaa gcagatgagg
4201 cagaaaattg gattgaaatt caatccccag atttttcctg ggtagcctcc
4251 ctccatgtta gtattgaggt ccacgagggt ttcaaatttt atgggagaag
4301 tgctggaccc cttacaatac cagctactgt cgccgatgtt agtgcggtat
4351 caggctctta ggtatttctt atagagaata tccctccctg gtgatctgga
4401 gtaaaaagaa ccatttggtg ttgagataac caaattgaaa taactcaact
4451 ttgagcaatg cttagacctt cgtggttgct ctcatattta aggtcattgt
4501 gaaattttct tttgttttcc taatttaggt ttaatttctg ttgtgtgttt
4551 aattactgtt ttcagtggcg atgcataggg tttgtccttt tccctgtggt
4601 gctatgttgg acacaaaaag attttctctt ttgtaaatga taaaatgttt
4651 tcttcaaaaa gc