Sequence of DPV Red clover necrotic mosaic virus
Red clover necrotic mosaic virus (RCNMV) RNA2
ACC No: X08021
Dated: 2005-04-18 | Length: 1448 | CRC: 120228824
!!NA_SEQUENCE 1.0
ID RCNMV2 standard; genomic RNA; VRL; 1448 BP.
XX
AC X08021;
XX
SV X08021.1
XX
DT 20-JUL-1988 (Rel. 17, Created)
DT 18-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE Red clover necrotic mosaic virus (RCNMV) RNA2
XX
KW RNA2 gene.
XX
OS Red clover necrotic mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC Dianthovirus.
XX
RN [1]
RP 1-1448
RA Lommel S.A.;
RT ;
RL Submitted (03-JUL-1988) to the EMBL/GenBank/DDBJ databases.
RL Lommel S.A., Kansas State University, Dept of Plant Pathology, Throckmorton
RL Hall, Kansa State University, Manhattan, KS 66506.
XX
RN [2]
RP 1-1448
RX MEDLINE; 88335609.
RX PUBMED; 3047682.
RA Lommel S.A., Weston Fina M., Xiong Z., Lomonossoff G.P.;
RT "The nucleotide sequence and gene organization of red clover necrotic
RT mosaic virus RNA-2";
RL Nucleic Acids Res. 16(17):8587-8602(1988).
XX
FH Key Location/Qualifiers
FH
FT source 1. .1448
FT /db_xref="taxon:12267"
FT /mol_type="genomic RNA"
FT /organism="Red clover necrotic mosaic virus"
FT /strain="Australian"
FT misc_feature 1. .1
FT /note="7'-methyl-G cap"
FT CDS 80. .1033
FT /db_xref="GOA:P10838"
FT /db_xref="InterPro:IPR000603"
FT /db_xref="UniProt/Swiss-Prot:P10838"
FT /note="ORF for 35 kDa polypeptide (AA 1-317)"
FT /protein_id="CAA30822.1"
FT /translation="MAVHVENLSDLAKTNDGVAVSLNRYTDWKCRSGVSEAPLIPASMM
FT SKITDYAKTTAKGNSVALNYTHVVLSLAPTIGVAIPGHVTVELINPNVEGPFQVMSGQT
FT LSWSPGAGKPCLMIFSVHHQLNSDHEPFRVRITNTGIPTKKSYARCHAYWGFDVGTRHR
FT YYKSEPARLIELEVGYQRTLLSSIKAVEAYVQFTFDTSRMEKNPQLCTKSNVNIIPPKA
FT ETGSIRGIAPPLSVVPNQGRESKVLKQKGGTGSKTTKLPSLEPSSGSSSGLSMSRRSHR
FT NVLNSSIPIKRNQDGNWLGDHLSDKGRVTDPNPERL"
XX
SQ Sequence 1448 BP; 422 A; 324 C; 359 G; 343 T; 0 other;
X08021 Length: 1448 May 10, 2005 10:10 Type: N Check: 509 ..
1 gaaacctcgc tctataaaca gattaattga ttggaagaaa acaagatcgt
51 aagactacca acaatacaaa gaggtttgga tggctgttca tgtggaaaat
101 ttaagtgatt tggcaaagac aaatgatgga gtagcagtat cattgaaccg
151 ttatactgat tggaaatgca ggtctggagt ttctgaagct cctcttatac
201 ctgccagtat gatgagtaag atcactgact acgctaaaac tactgctaaa
251 ggaaacagtg ttgcgcttaa ttacacccac gtagttcttt cgctagcacc
301 gacaattggt gtggcaattc caggacacgt caccgtagaa ttgataaatc
351 caaacgtgga aggaccgttt caagttatgt caggtcagac cttgtcgtgg
401 tcgccaggag ctggaaagcc ctgcctgatg atattctcag tccaccacca
451 actcaactcg gatcacgagc cttttagggt gcgaatcacg aataccggaa
501 tcccaacgaa gaaatcgtat gcaagatgcc atgcgtattg ggggtttgac
551 gtgggaactc gacaccgcta ttacaagtca gaaccagcgc gtctgattga
601 gttggaagta ggttatcagc ggacgttact gtcgagcatc aaggcagtgg
651 aagcctacgt gcagtttacc tttgacacaa gcaggatgga gaagaatcct
701 caactgtgca ccaaatccaa tgtgaacatc atccctccca aagcagagac
751 aggttcaatc agaggtatcg ccccgcctct cagtgttgta ccaaaccaag
801 gacgagagtc caaggtgttg aaacagaaag gaggaactgg cagcaaaacc
851 acgaagctgc cttcgttgga accttcttcc ggttccagtt ccggcttgag
901 tatgagccga agatctcaca gaaatgttct gaactcatct attccgatta
951 aacgtaacca agatggcaat tggttaggtg accacctatc tgacaagggc
1001 cgggttaccg acccaaatcc ggaaagactc tagacgagcc ggggaagtca
1051 gatgcctggc cactgaaaaa gtggaatctc atccagagta caaaagagaa
1101 agagaattgc tttggcttcg gcggaagacg aaaaggttta aatacaggct
1151 acgagttctc ctcgtagggt ctctctttct tggcctttag tgggctttgg
1201 tttaggttcc atttctacag cgtatggacc atggatgttc ttcagcctat
1251 cgtagtgtgt gcgatagcat tgcgttaggg gttactttcg agagatttgg
1301 aggggttggt ccctccggtg agagaagaaa actcatccca aacaaaaaac
1351 agggtttctg ataaccggtg cgacaatatg cccttccaag gcactgaccg
1401 gcacggagaa aaactataat gccatgtcgt ataacggcta ggcacccc