Sequence of DPV Tomato yellow leaf curl virus
Tomato yellow leaf curl virus TYLCV virion DNA.
ACC No: X15656
Dated: 2005-04-18 | Length: 2787 | CRC: -954996973
!!NA_SEQUENCE 1.0
ID TYLCV standard; genomic DNA; VRL; 2787 BP.
XX
AC X15656;
XX
SV X15656.1
XX
DT 22-NOV-1991 (Rel. 30, Created)
DT 18-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE Tomato yellow leaf curl virus TYLCV virion DNA.
XX
KW coat protein; replicase; unidentified reading frame.
XX
OS Tomato yellow leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RA Czosnek H., Navot N., Pichersky E., Zamir D.;
RT ;
RL Submitted (21-JUN-1989) to the EMBL/GenBank/DDBJ databases.
RL H. Czosnek, N. Navot, E. Pichersky and D. Zamir, THE HEBREW UNIVERSITY OF
RL JERUSALEM, FACULTY OF AGRICULTURE DEPT OF FIELD, ANDD VEGETABLE CROPS P O
RL BOX 12 REHOVOT, ISRAEL 76-100
XX
RN [2]
RX MEDLINE; 92024070.
RX PUBMED; 1926771.
RA Navot N., Pichersky E., Zeidan M., Zamir D., Czosnek H.;
RT "Tomato yellow leaf curl virus, a Bemisia tabaci-transmitted geminivirus
RT with a single genomic component";
RL Virology 185(1):151-161(1991).
XX
RN [5]
RC updates [1]
RP 1-2787
RA Navot N.;
RT ;
RL Submitted (09-JUN-1991) to the EMBL/GenBank/DDBJ databases.
RL Navot N., Weizmann Institute (lcnavot@weizmann.weizmann.ac.il)
XX
FH Key Location/Qualifiers
FH
FT source 1. .2787
FT /db_xref="taxon:10832"
FT /mol_type="genomic DNA"
FT /organism="Tomato yellow leaf curl virus"
FT CDS 474. .1256
FT /db_xref="GOA:P27256"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/Swiss-Prot:P27256"
FT /gene="ORF V1"
FT /product="coat protein"
FT /protein_id="CAA33686.1"
FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW
FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH
FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN
FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFKINSHVTLFIFIQEAAK
FT YENHTENALLLYMACTHASNPVYATMKIRIYFYDSISN"
FT CDS 314. .664
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProt/Swiss-Prot:P27269"
FT /gene="ORF V2"
FT /protein_id="CAA33687.1"
FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL
FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV
FT PKAQNIQNVSKP"
FT CDS complement(1714. .2787)
FT /db_xref="GOA:P27259"
FT /db_xref="HSSP:1L5I"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProt/Swiss-Prot:P27259"
FT /gene="OFF C1"
FT /protein_id="CAA33688.1"
FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLKKLETPTNKKYIKVC
FT KELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK
FT DGNFIDFGVSQIDGRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL
FT SSNLDRIFSPPLEVYVSPFLSSSFNQVPDELEEWVAENVVYSAARPWRPISIVIEGDSR
FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS
FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPLFA
FT SINQGPTQDSQEETNKA"
FT CDS complement(1398. .1805)
FT /db_xref="GOA:P27262"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="InterPro:IPR009072"
FT /db_xref="UniProt/Swiss-Prot:P27262"
FT /gene="ORF C2"
FT /protein_id="CAA33689.1"
FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHL
FT NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ
FT HQEGNGDSQMFSRLPNLDDITASDWSFLKSI"
FT CDS complement(1253. .1657)
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProt/Swiss-Prot:P27265"
FT /gene="ORF C3"
FT /protein_id="CAA33690.1"
FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI
FT ISIQIRFNHNIRKVMGIHKCFLDFRIWTTLQPQTGHFLRVFRYEVLKYLDSLGVISINN
FT VIRAVDHVLYDVLENTINVTETHDIKYKFY"
FT CDS complement(2343. .>2639)
FT /db_xref="UniProt/Swiss-Prot:P27271"
FT /gene="ORF C4"
FT /protein_id="CAA33691.1"
FT /translation="RMGNHISMCLSNSKANTNVRTNGSSTWYPQTGQHISIRTFRQLRA
FT QQMSRPTWRKTETSLILEFPKSMADQLEEVSNLPTTHMPKHSIQAVNPRPSIY"
XX
SQ Sequence 2787 BP; 757 A; 531 C; 603 G; 896 T; 0 other;
X15656 Length: 2787 May 10, 2005 10:10 Type: N Check: 7634 ..
1 gttgaaatga atcggtgtcc ctcaaagctc tatggcaatc ggtgtatcgg
51 tgtcttactt atacttggac acctaatggc tatttggtaa tttcataaat
101 gttcatttca attcaaaatt caaaattcaa aaatcaaatc attaaagcgg
151 ccatccgtat aatattaccg gatggccgcg ccttttcctt ttatgtggtc
201 cccacgaggg ttacacagat gttattgtca accaatcaaa ttgcattctc
251 aaacgttaga taagtgttca tttgtcttta tatacttggt ccccaagttt
301 tttgtcttgc aatatgtggg acccacttct taatgaattt cctgaatctg
351 ttcacggatt tcgttgtatg ttagctatta aatatttgca gtccgttgag
401 gaaacttacg agcccaatac attgggccac gatttaatta gggatcttat
451 atctgttgta agggcccgtg actatgtcga agcgaccagg cgatataatc
501 atttccacgc ccgtctcgaa ggttcgccga aggctgaact tcgacagccc
551 atacagcagc cgtgctgctg tccccattgt ccaaggcaca aacaagcgac
601 gatcatggac gtacaggccc atgtaccgaa agcccagaat atacagaatg
651 tatcgaagcc ctgatgttcc ccgtggatgt gaaggcccat gtaaagtcca
701 gtcttatgag caacgggatg atattaagca tactggtatt gttcgttgtg
751 ttagtgatgt tactcgtgga tctggaatta ctcacagagt gggtaagagg
801 ttctgtgtta aatcgatata ttttttaggt aaagtctgga tggatgaaaa
851 tatcaagaag cagaatcaca ctaatcaggt catgttcttc ttggtccgtg
901 atagaaggcc ctatggaaac agcccaatgg attttggaca ggtttttaat
951 atgttcgata atgagcccag taccgcaacc gtgaagaatg atttgcgtga
1001 taggtttcaa gtgatgagga aatttcatgc tacagttatt ggtgggccct
1051 ctggaatgaa ggaacaggca ttagttaaga gattttttaa aattaacagt
1101 catgtaactt tatttatatt cattcaggag gcagcaaagt acgagaacca
1151 tactgaaaac gccttgttat tgtatatggc atgtacgcat gcctctaatc
1201 cagtgtatgc aactatgaaa atacgcatct atttctatga ttcaatatca
1251 aattaataaa atttatattt tatatcatga gtttctgtta catttattgt
1301 gttttcaagt acatcataca atacatgatc aactgctctg attacattgt
1351 taatggaaat tacaccaaga ctatctaaat acttaagaac ttcatatcta
1401 aatactctta agaaatgacc agtctgaggc tgtaatgtcg tccaaattcg
1451 gaagtcgaga aaacatttgt gaatccccat taccttcctg atgttgtggt
1501 tgaatcttat ctgaatggaa atgatgtcgt ggttcattag aaatggcctc
1551 tggctgtgtt ctgttatctt gaaatagagg ggattgttta tctcccagat
1601 aaaaacgcca ttctctgcct gaggagcagt gatgagttcc cctgtgcgtg
1651 aatccatgat tattgcagtt gaggtggagg tagtatgagc agccacagtc
1701 taggtctaca cgcttacgcc ttattggttt cttcttggct atcttgtgtt
1751 ggaccttgat tgatacttgc gaacagtggc tcgtagaggg tgacgaaggt
1801 tgcattcttg agagcccaat ttttcaagga tatgtttttt tcttcgtcta
1851 gatattccct atatgaggag gtaggtcctg gattgcagag gaagatagtg
1901 ggaattcccc ctttaatttg aatgggcttc ccgtactttg tgttgctttg
1951 ccagtccctc tgggccccca tgaattcctt gaagtgcttt aaataatgcg
2001 ggtctacgtc atcaatgacg ttgtaccacg catcattact gtacaccttt
2051 gggcttaggt ctagatgtcc acataaataa ttatgtgggc ctagagacct
2101 ggcccacatt gttttgcctg ttctgctatc accctcaatg acaatactta
2151 tgggtctcca tggccgcgca gcggaataca cgacgttctc ggcgacccac
2201 tcttcaagtt catctggaac ttgattaaaa gaagaagaaa gaaatggaga
2251 aacataaact tctaaaggag gactaaaaat cctatctaaa tttgaactta
2301 aattatgaaa ttgtaaaata tagtcctttg gggccttctc ttttaatata
2351 ttgagggcct cggatttact gcctgaattg agtgcttcgg catatgcgtc
2401 gttggcagat tgctgacctc ctctagctga tctgccatcg atttgggaaa
2451 ctccaaaatc aatgaagttt ccgtctttct ccacgtaggt cttgacatct
2501 gttgagctct tagctgcctg aatgttcgga tggaaatgtg ctgacctgtt
2551 tggggatacc aagtcgaaga accgttggtt cttacattgg tatttgcctt
2601 cgaattggat aagcacatgg agatgtggtt ccccattctc gtggagttct
2651 ttgcaaactt tgatgtattt tttatttgtt ggggtttcta gtttttttaa
2701 ttgggaaagt gcttcctctt tagagagaga acaattggga tatgttagga
2751 aataattttt ggcatatatt ttaaataaac gaggcat