Sequence of DPV Rice stripe virus
Rice stripe virus RNA3 genomic RNA for coat protein (two ORF's)
ACC No: X53563
Dated: 2000-02-22 | Length: 2504 | CRC: -1517064931
!!NA_SEQUENCE 1.0
ID RSVRNA3 standard; RNA; VRL; 2504 BP.
XX
AC X53563;
XX
SV X53563.1
XX
DT 03-SEP-1991 (Rel. 29, Created)
DT 22-FEB-2000 (Rel. 62, Last updated, Version 3)
XX
DE Rice stripe virus RNA3 genomic RNA for coat protein (two ORF's)
XX
KW coat protein; RNA3.
XX
OS rice stripe virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN [1]
RP 1-2504
RA Zhu Y.;
RT ;
RL Submitted (20-JUN-1990) to the EMBL/GenBank/DDBJ databases.
RL Zhu Y., Plantech Research Institute, 1000, Kamoshida-cho, Midori-ku,
RL Yokohama-city 227, Japan.
XX
RN [2]
RP 1-2504
RX MEDLINE; 91202110.
RA Zhu Y., Hayakawa T., Toriyama S., Takahashi M.;
RT "Complete Nucleotide Sequence of RNA3 of Rice Stripe Virus: an ambisense
RT coding strategy";
RL J. Gen. Virol. 72:763-767(1991).
XX
DR SWISS-PROT; P26657; COAT_RSVT.
DR SWISS-PROT; P26658; VNS3_RSVT.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2504
FT /db_xref="taxon:12331"
FT /organism="rice stripe virus"
FT /isolate="isolate T"
FT CDS 66. .701
FT /db_xref="SWISS-PROT:P26658"
FT /gene="ORF1"
FT /protein_id="CAA37634.1"
FT /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD
FT IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY
FT VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN
FT RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALESLPGSSPAVL"
FT CDS complement(1444. .2412)
FT /db_xref="SWISS-PROT:P26657"
FT /evidence=EXPERIMENTAL
FT /gene="ORF2"
FT /product="coat protein"
FT /protein_id="CAA37635.1"
FT /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG
FT YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR
FT YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV
FT PQYIKLESETAPYCSTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT
FT TGLLVITCKSKNLSDKKKEEGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR
FT LYLAQQSKLMKILAENTSKTATEVSGLVKEFFEDEAEGADD"
FT misc_RNA 1. .2504
FT /note="ssRNA 3"
XX
SQ Sequence 2504 BP; 762 A; 535 C; 431 G; 776 T; 0 other;
X53563 Length: 2504 December 21, 2001 16:01 Type: N Check: 5344 ..
1 acacaaagtc ctgggtaaaa tagttatatt tttactatac aatacaattc
51 cgacatcatc taagtatgaa cgtgttcaca tcgtctgtgg gttctgtgga
101 atttgatcat cccctgcttt tggagaatga tctgaccagt ttgagcatca
151 actgtgacga tgtccattgt tcttcaagag ccttatgtta tatatatgac
201 atccattcat ctaggcaccc ctccattgat gagcatcagt ttctgaggct
251 tcttcatggc cctgatgatg ctgtcactct aggctccttc ttgaaaactc
301 tgatctggat tctgtcccat gataagaatc tcccagaaga gtacagactt
351 cctaccataa tgatgtcatc ctcttatgtg aaattcttca ctgaagtgaa
401 gcctagaccc ccatcaacaa attgctggac atgcagaatg tccaaagaca
451 atttgccctt taccgttcct agtgtcaagg gatttccccc agatgcagag
501 ctctacattg tgccaatatc tgaccatgat ggaaagcctg tcaaatttga
551 caataggaag actctatata gatcacctag taagaaaagg cataagtatg
601 tcatttcttc tgataaacca cctcttagtg cacgttatgt caagtacgta
651 gattctagtg cactagaatc cttaccaggc agctctccag ctgtgctgta
701 gaaataaaag gaaaaagaaa aaaagaaaag aaaacaaata atcaaaaaaa
751 cacaaaaaaa tcttaaaaat gaaaaacaaa aaaactttaa aactaaaaaa
801 actaaaaaac atcatgatct aaaaaaacct gcacaccact ggttgtctag
851 tgggctctag ttggtagaga aagctatgct tttgcctaaa gccatgattg
901 gccaatcctt aaaatgtgct aagcacatta tccgaagatg tctcggatgt
951 ttttttacct aacctaattt ttttgtattt ttatataatc ttttgatttt
1001 tttgtatttt atatacatat ttttaatttt tttgattttt tttgattttt
1051 ttgatttttt tgattttttt gtttttaata tgttttcttc taattactac
1101 agtaatatat ttaattatac atgtacttaa aatatatagt atatattata
1151 aaatagagca atataataaa gctagtatta ctatattaca aacatacaac
1201 taaatattta gatagactta tcaaactaaa gactctactg gagagtgagc
1251 aataataatg gcaatacatc acacacaaag cccaaaacca cacagacaaa
1301 gtaactcata gaatatgatt aaaaactaaa atatacatat taaatataca
1351 tattaactta cacttaaaga gacaacacac tgtttgaaga catgcgtctt
1401 ccagggagat atgagatccc ccacaactac tgatttgttc agtctagtca
1451 tctgcacctt ctgcctcatc ctcgaagaac tccttcacca gcccgctgac
1501 ttctgttgct gtctttgaag tgttctcagc aaggatcttc atcagcttgc
1551 tctgttgagc caagtacagc cttgtctggt tcccataagt gctgatcgta
1601 ttgacagaca taccagccag cgcatcgaag atagtagtct tcactttccc
1651 attggtgatg aattcatcta agaccttctt cctgccttct tccttcttct
1701 tgtcagacag gttctttgac ttgcatgtga tgaccaggag accagttgtg
1751 tacttcatca tgtctatgtc cttcgtcaga ccacgctcct tcttcttacc
1801 ctctggcatg gtctttttag ttatttggaa ggagtgaatg atgtgcacaa
1851 caaacaaaat gtgacttagg gagtgagttg agcagtaagg agctgtttca
1901 ctctccagtt tgatatattg tggaacatag tcccacagta agttgtcaca
1951 tcctgtcagc cccaggtcag aagagtccac agccatctta acaccagaaa
2001 tttgtctcac aacttcatgt gagacatttg ggaatagctg agccaatctt
2051 ccaagtgtga tagcattggc atttgttccc accgaggaca ctatcccata
2101 cctcgacacc aaggtcgaag cctctgtgct tccagccgcc accttcactt
2151 tcttagtgac atctctcaca aagccagtgc ctctcacata tctcatagtg
2201 atgcacatag tcatatcctt ggccagtgtg tcaccacctt tgtccttcaa
2251 tatgccaatc agagttgcag catcgtagcc tgcatactct atctgaccag
2301 caaaggtcac aacatcagct ttatgagcag tcaggtaaga caacgcatct
2351 ttggagatgt cattgattgc cttctgcaaa tcagctagag tggctggctt
2401 gttggtaccc attctagcaa gaggtactgg aggaatggtt gcggcttaga
2451 tgaaatttgg aatgtaaaag caaaatcgaa aattttatta cccagacttt
2501 gtgt