Sequence of DPV Belladonna mottle virus

Belladonna mottle virus VP gene for virion protein and ORF

ACC No: X54529

Dated: 2005-04-18 | Length: 615 | CRC: -70123274

                !!NA_SEQUENCE 1.0
ID   BMVVP      standard; genomic RNA; VRL; 615 BP.
XX
AC   X54529;
XX
SV   X54529.1
XX
DT   26-NOV-1990 (Rel. 25, Created)
DT   18-APR-2005 (Rel. 83, Last updated, Version 5)
XX
DE   Belladonna mottle virus VP gene for virion protein and ORF
XX
KW   virion protein; VP gene.
XX
OS   Belladonna mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymoviridae;
OC   Tymovirus.
XX
RN   [1]
RP   1-615
RA   Ding S.W.;
RT   ;
RL   Submitted (23-AUG-1990) to the EMBL/GenBank/DDBJ databases.
RL   Ding S.-W., Molecular & Evolutionary Systematics, Research School of
RL   Biological Sciences, Australian National University, GPO Box 475, Canberra,
RL   A.C.T., 2601, Australia.
XX
RN   [2]
RP   1-48
RX   MEDLINE; 90206777.
RX   PUBMED; 2320413.
RA   Ding S., Howe J., Keese P., Mackenzie A., Meek D., Osorio-Keese M.,
RA   Skotnicki M., Srifah P., Torronen M., Gibbs A.;
RT   "The tymobox, a sequence shared by most tymoviruses: its use in molecular
RT   studies of tymoviruses";
RL   Nucleic Acids Res. 18(5):1181-1187(1990).
XX
RN   [3]
RP   49-615
RX   MEDLINE; 91045090.
RX   PUBMED; 2235505.
RA   Ding S.W., Howe J., Mackenzie A., Skotnicki M., Gibbs A.;
RT   "Nucleotide sequence of the virion protein gene of belladonna mottle
RT   tymovirus.";
RL   Nucleic Acids Res. 18(20):6138-6138(1990).
XX
CC   mRNA start is known by cDNA to genomic mRNA sequencing;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .615
FT                   /db_xref="taxon:12149"
FT                   /mol_type="genomic RNA"
FT                   /organism="Belladonna mottle virus"
FT                   /strain="European"
FT                   /map="3' end genome"
FT   promoter        13. .28
FT                   /note="tymobox"
FT   misc_feature    38. .38
FT                   /note="mRNA start for VP"
FT   CDS             49. .615
FT                   /db_xref="GOA:Q65665"
FT                   /db_xref="HSSP:1QJZ"
FT                   /db_xref="InterPro:IPR000574"
FT                   /db_xref="UniProt/TrEMBL:Q65665"
FT                   /note="VP protein (AA 1 - 188)"
FT                   /protein_id="CAA38394.1"
FT                   /translation="MDESKIVTVKQPSISAPGFTLSAPDGEQAGSIRQIFQFEATSVGV
FT                   YETLAQVNLSSSDSLAKLTSGYRRAKVVELFLTITPTQRAIDCPVTVDVAWVPANSTAP
FT                   PSKILSIYGGQRFLIGGPITTSQIIRVPCNLQSVNAMIKDSTIYTDSPKLLVYAPIAKG
FT                   SPKTPSATVQIGGQILLSAPLLQAL"
FT   CDS             53. .403
FT                   /db_xref="UniProt/TrEMBL:Q65666"
FT                   /note="ORF2 (AA 1 - 116)"
FT                   /protein_id="CAA38395.1"
FT                   /translation="MNQKLSPSSNPASLLPALLFQPLMENRPAPSARSSSSKPLLSASM
FT                   RHWPRSTSPPLTPWPNSPLGIDVPKSSNSSSPSLPRKEPSTAPSLSTWHGSRLIPQLHP
FT                   PKFSPSMAANDF"
XX
SQ   Sequence 615 BP; 138 A; 210 C; 111 G; 156 T; 0 other;

   X54529  Length: 615  May 10, 2005 10:10  Type: N  Check: 6898  ..

       1  gtttcttcac ttgagtctga attgcttcat ggtttccaat agcaaccaat
      51  ggatgaatca aaaattgtca ccgtcaagca acccagcatc tctgctcccg
     101  gctttactct ttcagcccct gatggagaac aggccggctc catccgccag
     151  atcttccagt tcgaagccac ttctgtcggc gtctatgaga cactggccca
     201  ggtcaacctc tcctcctctg actccctggc caaactcacc tctgggtatc
     251  gacgtgccaa agtcgtcgaa ctcttcctca ccatcactcc cacgcaaaga
     301  gccatcgact gccccgtcac tgtcgacgtg gcatgggtcc cggctaattc
     351  cacagctcca ccctccaaaa ttctctccat ctatggcggc caacgatttt
     401  taatcggagg tcccatcacc acttctcaga tcattcgtgt tccctgcaat
     451  ctgcaatctg tgaacgccat gatcaaagac tccaccattt acaccgactc
     501  ccccaagctt ctggtttatg ctccaattgc caaaggaagt cccaaaacac
     551  cctctgccac tgtccaaatc ggtggtcaga tcctcttgtc tgctcccctc
     601  ttgcaggctc tataa