Sequence of DPV Tomato yellow leaf curl Thailand virus
Tomato yellow leaf curl Thailand virus-[1] complete genome (TYLCV-TH A-DNA)
ACC No: X63015
Dated: 2005-04-18 | Length: 2743 | CRC: -1405991855
!!NA_SEQUENCE 1.0
ID TYLCBCG standard; genomic DNA; VRL; 2743 BP.
XX
AC X63015;
XX
SV X63015.1
XX
DT 11-AUG-1999 (Rel. 60, Created)
DT 18-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE Tomato yellow leaf curl Thailand virus-[1] complete genome (TYLCV-TH A-DNA)
XX
KW coat protein.
XX
OS Tomato yellow leaf curl Thailand virus-[1]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2743
RA Rochester D.E.;
RT ;
RL Submitted (06-NOV-1991) to the EMBL/GenBank/DDBJ databases.
RL D.E. Rochester, Box 1137 Biology Dept, Washington University, St. Louis, MO
RL 63130, USA
XX
RN [3]
RX MEDLINE; 94172321.
RX PUBMED; 8126446.
RA Rochester D.E., Fauquet C.M., Beachy R.N.;
RT "Complete nucleotide sequence of the Geminivirus, Tomato yellow leaf curl
RT virus (Thailand isolate)";
RL J. Gen. Virol. 75:477-485(1994).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2743
FT /db_xref="taxon:221541"
FT /mol_type="genomic DNA"
FT /organism="Tomato yellow leaf curl Thailand virus-[1]"
FT /clone="pDR9"
FT misc_feature 1. .181
FT /note="common region A-DNA"
FT CDS 282. .620
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProt/TrEMBL:Q9QNL5"
FT /gene="precoat ORF"
FT /protein_id="CAA44743.1"
FT /translation="MWDPLLNEFPENVHGFRCMLAVKYLQAVEKTYSPDTLGFDLIRDL
FT IGVIRAKNYVEASSRYSHFHSRLESTSPSELRQPIQQPCCCPHCPRHKRAGMEEPTCIQ
FT KAQDLQNV"
FT CDS 442. .1212
FT /db_xref="GOA:Q9QNL4"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/TrEMBL:Q9QNL4"
FT /gene="coat protein ORF"
FT /protein_id="CAA44744.1"
FT /translation="MSKRPADILISTPVSKVRRRLNFDSPYNSRAAVPTVRVTKGQVWK
FT NRPAYRKPRIYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLYDVTRGIGLTHR
FT VGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPYDFQQVFNVYDNEP
FT STATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH
FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN"
FT CDS complement(1354. .1758)
FT /db_xref="GOA:Q9QNL3"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProt/TrEMBL:Q9QNL3"
FT /gene="AL2 ORF"
FT /protein_id="CAA44745.1"
FT /translation="MRSSSPSKAHSTQVPIKVQHRIAKRTTRRRRVDLPCGCSYFVAIG
FT CHNNGFTHRGTTHCNSIREWRIYLDGQKSPIFQDNQAPRETIPEEPRHNHVTNPVQLQP
FT EESVGDTQMFSSLQNLDSFTSSDLAFLKSI"
FT CDS complement(1209. .1613)
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProt/TrEMBL:Q76R33"
FT /gene="AL3 ORF"
FT /protein_id="CAA44746.1"
FT /translation="MDSRTGELLTATQSESGVYIWTVKNPLYFKITRHLERPFQRNHDI
FT ITLQIQFNYNLRKALGIHKCFLACKIWTHLHPQTSRFLRVFKYQCNKYLNRLGVISINN
FT VIRAISHVLYNVLEGTIDVIEEHDIKFNIY"
FT CDS complement(1661. .2743)
FT /db_xref="GOA:Q9QNL2"
FT /db_xref="HSSP:1L5I"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProt/TrEMBL:Q9QNL2"
FT /gene="AL1 ORF"
FT /protein_id="CAA44747.1"
FT /translation="MPPSKKFLINAKNYFLTYPHCSLTKEEALSQILNLSTPTNKLFIR
FT ICRELHEDGTPHLHLLIQFEGKFKCQNNRFFDLTSPTRSAHFHPNIQGAKSSTDVKAYM
FT EKDGDVLDHGIFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDFVLQFH
FT NLNSNLDRIFTPPIEEYISPFSSSSFNQVPEELEEWACNNVLSRARPLRPISIVIEGDS
FT RTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWFNVIDDVDPHYLKHFKEFMGAQRDWQ
FT SNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALRNWAIKNAIFVTLEGPLY
FT SGTYQGATPNSQEDNQTTES"
XX
SQ Sequence 2743 BP; 732 A; 532 C; 615 G; 864 T; 0 other;
X63015 Length: 2743 May 10, 2005 10:10 Type: N Check: 4698 ..
1 attgacttgg tcaatcgggt cctctcaaac ttggctatgc aatcggggaa
51 tgggtcctta ttatagttga ggacctaaat ggcataattg taaataagtg
101 tatgaaattc aaaatttaaa attcaatcgt ggccatccgt ataatattac
151 cggatggccg cgattttttt aaagtggtcc ccttgatgtg atatgtcatc
201 caatcagaac actctttgaa agcctaatta tttatggtcc cctatttaag
251 acttagtccc caagtttcgg cgaaattcaa aatgtgggat ccactactaa
301 acgaatttcc agaaaacgtc cacggtttcc gttgtatgtt agcggtgaag
351 tatctgcaag cggtcgagaa gacttattcc cctgatactc tagggtttga
401 tctcatccgt gatctcatcg gtgtaattcg tgcgaagaac tatgtcgaag
451 cgtccagcag atattctcat ttccactccc gtctcgaaag tacgtcgccg
501 tctgaacttc gacagcccat acaacagccg tgctgctgtc cccactgtcc
551 gcgtcacaaa agggcaggta tggaagaacc gacctgcata cagaaagccc
601 aggatctaca gaatgtatag aagccctgat gtccctaagg gatgtgaggg
651 cccatgtaag gtccaatctt tcgatgcgaa gaacgacatt ggacatatgg
701 gcaaggtaat atgtctgtat gacgttaccc gtggtattgg gcttactcat
751 cgagttggca agcgtttctg tgtgaagtca ctttattttg tcgggaagat
801 ctggatggat gaaaatatta aggttaagaa tcatactaac accgttttat
851 tctggatagt tagggatcgg cgtcctactg gaacgcctta tgattttcag
901 caggtcttta atgtatatga taatgaaccc agcactgcta ctgtgaagaa
951 cgaccagcgt gatcgtttcc aggttataag gaggttccag gcaacagtta
1001 ctggtggaca atatgcagct aaggagcagg cgattattag aaagttttat
1051 cgtgttaata attatgtagt ttataatcac caggaagctg ggaagtatga
1101 gaaccatact gaaaatgctt tgttgttata tatggcatgt actcatgcct
1151 ctaaccctgt gtatgctact ttgaaagtca ggagttattt ctatgactca
1201 gtgacgaatt aataaatatt aaattttata tcatgttctt caattacatc
1251 aattgttcct tctaatacat tgtacaatac atgagatatt gccctaatta
1301 cattgtttat actaatcacg cctaatctat ttaaatattt attacattga
1351 tatttaaata ctcttaagaa acgcgaggtc tgaggatgta aatgagtcca
1401 gattttgcag gctagaaaac atttgtgtat ccccaacgct ttcctcaggt
1451 tgtagttgaa ctggatttgt aacgtgatta tgtcgtggtt cctctggaat
1501 ggtctctcta ggtgcctggt tatcttgaaa tataggggat ttttgaccgt
1551 ccagatatat acgccactct ctgattgagt tgcagtgagt agttccccgg
1601 tgcgtgaatc cattattgtg acagcctatg gcgacgaagt acgaacatcc
1651 acaaggtaga tcaactctcc gtcgtctggt tgtcctcttg gctattcggt
1701 gttgcacctt gataggtacc tgagtagagt gggccttcga gggtgacgaa
1751 gatcgcattt tttatagccc agtttctaag tgcggagttc ttttcctctt
1801 ccaagtactc tttatagctg gagtttggtc caggattgca gaggaagata
1851 gtgggaattc cgcctttaat ttgaactggt ttgccgtatt tggtgttgct
1901 ttgccagtcc ctttgggccc ccatgaactc tttaaagtgt tttagataat
1951 gcggatcgac gtcatcgatg acgttgaacc acgcatcatt attatacact
2001 tttggactta aatctaaatg gccacacaga taattatgtg gtcccaatga
2051 cctagcccac atcgtcttcc ctgttctgct atcaccctca atgactatac
2101 ttattggtct caatggccgc gcacgactga gaacattatt acaagcccac
2151 tcttcaagtt cttcgggaac ttgattgaaa gaagaagaag aaaagggaga
2201 aatatattcc tctattggag gagtaaaaat cctatctaaa ttagaattta
2251 aattgtgaaa ttgtaaaaca aaatctttag gggccttttc cctcagtata
2301 ttgagggccg aagccttgga ccctgaattg attgcctcgg catatgcgtc
2351 gttggcagat tggcaacctc ctctagccga tcttccatcg atttggaaaa
2401 ttccatgatc aagcacgtct ccgtcttttt ccatgtatgc tttaacatct
2451 gttgagcttt tagctccctg aatgttcgga tggaaatgtg ctgacctggt
2501 tggggatgtg agatcgaaga atcggttatt ttggcatttg aattttcctt
2551 cgaattggat gaggagatgc aggtgaggag tcccatcttc atggagttcc
2601 ctgcagattc tgatgaataa tttattagtt ggagttgata ggtttaatat
2651 ttgggagagt gcttcttctt tggtgagtga gcagtgtggg tatgtgagga
2701 aataattctt ggcatttatt agaaatttct ttgaaggagg cat