Sequence of DPV African cassava mosaic virus

African Cassava Mosaic Virus gene for coat protein (clone pPCR6).

ACC No: X68318

Dated: 2004-09-09 | Length: 852 | CRC: 373769381

                !!NA_SEQUENCE 1.0
ID   ACPPCR6    standard; genomic DNA; VRL; 852 BP.
XX
AC   X68318;
XX
SV   X68318.1
XX
DT   17-SEP-1992 (Rel. 33, Created)
DT   09-SEP-2004 (Rel. 81, Last updated, Version 3)
XX
DE   African Cassava Mosaic Virus gene for coat protein (clone pPCR6).
XX
KW   coat protein gene.
XX
OS   African cassava mosaic virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-852
RA   Briddon R.W.;
RT   ;
RL   Submitted (09-SEP-1992) to the EMBL/GenBank/DDBJ databases.
RL   R.W. Briddon, John Innes Institute, Dept. of Virus Research, John Innes
RL   Centre for Plant Science Res., Colney Lane, Norwich, NR4 7UH, UK
XX
RN   [2]
RP   1-852
RX   DOI; 10.1016/0166-0934(93)90085-6.
RX   MEDLINE; 93367004.
RX   PUBMED; 8360316.
RA   Briddon R.W., Prescott A.G., Lunness P., Chamberlin L.C.L., Markham P.G.;
RT   "Rapid production of full-length, infectious geminivirus clones by abutting
RT   primer PCR";
RL   J. Virol. Methods 43(1):7-20(1993).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .852
FT                   /db_xref="taxon:10817"
FT                   /mol_type="genomic DNA"
FT                   /organism="African cassava mosaic virus"
FT                   /clone="pPCR6"
FT   CDS             71. .847
FT                   /db_xref="GOA:Q64816"
FT                   /db_xref="UniProt/TrEMBL:Q64816"
FT                   /note="V1 ORF"
FT                   /product="coat protein"
FT                   /protein_id="CAA48395.1"
FT                   /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTSRKRPW
FT                   MNRPMYRRPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTH
FT                   RVGKRLCIKSIYILGKIWMDENIKKQNHTNNVMFYLLRDRRPYGNTPQDFGHIFNMFDN
FT                   EPSTATIKNDLRDRFQVLRKFHATVIGGPSGMKEQALVKRFYRLNHHVTYNHQEAGKYE
FT                   NHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN"
XX
SQ   Sequence 852 BP; 248 A; 171 C; 218 G; 215 T; 0 other;

X68318  Length: 852  September 14, 2004 08:36  Type: N  Check: 6351  ..

       1  acatacgagc ccagtacttt aaaccacgat ctggttagag atctagtctc
      51  ggtcatcagg gctcgtaatt atgtcgaagc gaccaggaga tatcatcatt
     101  tccactccag gctccaaggt tcgtcgaagg ctgaacttcg acagcccata
     151  caggaaccgt gctactgccc ccactgtcca cgtcacaagt cgaaaacggc
     201  cctggatgaa caggcccatg tacagaaggc ccatgatgta caggatgtat
     251  agaagcccag acatacctag gggttgtgaa ggcccatgta aggtccagtc
     301  gtttgagcag agggatgatg tgaagcacct tgggatctgt aaggtgatta
     351  gtgatgtgac ccgggggcct gggctgacac acagagtcgg aaagaggttg
     401  tgtatcaagt ccatttacat tcttggtaag atctggatgg atgaaaatat
     451  taagaagcag aatcacacga ataatgtgat gttttacctg cttagggata
     501  gaaggcctta tggcaatacg ccccaagact ttgggcatat atttaacatg
     551  tttgataatg agcccagtac tgcaacaatt aagaacgatt tgagggatag
     601  gtttcaggtt ttgaggaaat ttcatgccac tgttattggt ggtccatcgg
     651  gcatgaagga gcaggcgttg gtgaaaaggt tttacaggtt gaatcatcac
     701  gtgacatata atcatcagga ggcagggaag tacgagaatc acacagagaa
     751  tgctttgctt ttgtacatgg catgtacgca tgcctccaat cctgtatatg
     801  cgacgttgaa aatacgtata tacttctatg acagtattgg caattaataa
     851  ac