Sequence of DPV Arabis mosaic virus
Arabis mosaic virus RNA for polyprotein P2-L
ACC No: X81815
Dated: 1999-02-10 | Length: 3711 | CRC: -169384358
!!NA_SEQUENCE 1.0
ID AMVRNA2L standard; RNA; VRL; 3711 BP.
XX
AC X81815;
XX
SV X81815.1
XX
DT 30-MAR-1995 (Rel. 43, Created)
DT 10-FEB-1999 (Rel. 58, Last updated, Version 3)
XX
DE Arabis mosaic virus RNA for polyprotein P2-L
XX
KW coat protein; polyprotein P2"; RNA2-L gene.
XX
OS Arabis mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC Nepovirus; Subgroup A.
XX
RN [1]
RA Loudes A.M., Ritzenthaler C., Pinck M., Serghini M.A., Pinck L.;
RT "The 119 kDa and 124 kDa polyproteins of arabis mosaic nepovirus (isolate
RT S) are encoded by two distinct RNA2 species";
RL J. Gen. Virol. 76:899-906(1995).
XX
RN [2]
RP 1-3711
RA Pinck L.;
RT ;
RL Submitted (21-SEP-1994) to the EMBL/GenBank/DDBJ databases.
RL L. Pinck, Inst. de Biologie Moleculaire des Plantes IBMP, 12 rue General
RL Zimmer, 67084 Strasbourg Cedex, FRANCE
XX
DR SPTREMBL; Q65029; Q65029.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3711
FT /db_xref="taxon:12271"
FT /organism="Arabis mosaic virus"
FT /isolate="S"
FT /variety="RNA2-L"
FT CDS 261. .3515
FT /db_xref="SPTREMBL:Q65029"
FT /gene="RNA2-L"
FT /product="polyprotein P2' 119KDa"
FT /protein_id="CAA57413.1"
FT /translation="MGILYSCYRRFACQPVVDVPYIRPTTFLEARASMRIAQAEGAAAA
FT LFAELPLEYPQGVPLVQPTEPVKAQEVMVPPVRVIPSPPPVPRPYSRPIGAFAPTRSGF
FT IRATMERLTREREESRAAALFAELPLEYPQGAPLVVPRGFAAMRWTYHATWRRWYDTSD
FT ERPLRAHPGGPALPPPSPPPKIQKPPSFEERLQAALQRQSCARAFALETSLGPNMAWVG
FT MAAIPSISVCCADGRTTGGQTIAQEADPINHRVASNTAPGRAQWISERRSALRRREQAN
FT SLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRNAYAPRGLWRGPSTRANYTLD
FT FRLNGIPTGQNTLEILYNPVADEEMDDYRDRGMSAVVIDALEIAINPFGMPGNPTDLTV
FT VATYGHERNMERAFIGSSSTFLGNGLARAIFFPGLQYSQEEPRRESLIRLYVASTNATV
FT DADSILAAISVGTLRQHIGSLHNRTVASSVHRAQWQGTTLRATMMGNAVVVSPEGSLVA
FT GTPEANVQIGGGSSMRMVGPLAWENVEEPGQTFTIRNRSRSMRVDRNADVGVALPRMST
FT TTRGLAGRDSVQVPKDCQAGKYLKTLDLREMVSGFSGIQYEKWITAGIVMPDFKVVIRY
FT PANAFTGITWVMSFDAYNRITSSISTTASPAYTLSVPHWLLHHKNGTTSCDLDYGELCG
FT HAMWFGATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKSFLGKPNFIYSADA
FT FNGSLKFLTIPPLEYDLSATSAYKSVSLLLGQTLVDGTHKVYNFNNTLLSYYLGIGGIV
FT KGKVHVCSPCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIEEDGSFAIEIRSPYHRTPL
FT RLIDAQSASSFTSTLNFYAISGPIAPSGETAKMPVVVQIEEIALPGLSVPSFPNDYFLW
FT VDFSSFTVDVEEYVIGSRFFDISSTTSTVALGDNPFAHMIACHGLHHGILDLKLMWDLE
FT GEFGKSAGGVTITKLCGDKATGMDGASRVCALQNMGCETELYIGNYAGANPNTALSLYS
FT RWLAIKLDKAKSMKMLRILCKPRGNFEFYGRTCFKV"
FT mat_peptide 261. .959
FT /product="N-terminal 26KDa protein "
FT mat_peptide 960. .1997
FT /product="central putative movement 38KDa protein"
FT mat_peptide 1998. .3512
FT /product="C-terminal coat 55.8KDa protein"
XX
SQ Sequence 3711 BP; 887 A; 806 C; 923 G; 1095 T; 0 other;
X81815 Length: 3711 December 21, 2001 16:03 Type: N Check: 5003 ..
1 atgaaaattt ttgtggagtt ttcatataaa cgcaatccac aaccctttca
51 accaagagtt taggaaactc aaaattgttt acaatcaatc cgttaagagc
101 ggaaacaaag tcaaaccgtt aggagcggtg ccaaagcgaa gagtttaaga
151 aactcacaat cttcttcttt ttctttctta cttacgtgct ttatttattt
201 agcgtttgtg tagtctgctt ctttggagaa gcgttttgtt ttcttttctt
251 ctcagccctt atgggtattt tgtattcttg ctacaggcgt tttgcctgtc
301 agcctgtggt ggatgttcct tacatccgcc ctacaacttt tctggaagca
351 agggcatcca tgcggattgc tcaagctgaa ggagcagctg cggcactgtt
401 tgccgaattg ccactggagt atcctcaggg agttccccta gtgcagccga
451 ccgagccggt taaagctcaa gaggtgatgg tgccacctgt gagggtaatt
501 ccttcaccgc cccctgtacc aaggccttat tctaggccaa ttggggcttt
551 tgcaccaacc cggtccgggt ttatacgggc caccatggaa agactcaccc
601 gggaacggga agagtcacga gctgcggcac tctttgccga attgcctttg
651 gagtatcctc aaggtgctcc attggttgtc cctcgtggct ttgcggccat
701 gcggtggact tatcatgcca cctggaggcg gtggtatgac actagtgatg
751 agcggccttt gcgtgctcat cctggtggtc ctgctttgcc tccaccctcc
801 ccccccccaa aaatccaaaa accaccctct tttgaggaga ggttgcaggc
851 tgcccttcaa aggcagtcct gtgccagggc ttttgctctg gagacttcgc
901 tgggccctaa tatggcctgg gtgggaatgg ctgccatccc cagcatttct
951 gtgtgctgcg ctgatggtag gactaccggt gggcaaacaa ttgcccagga
1001 ggctgaccct attaatcata gggttgcttc taacacagcc cccggtaggg
1051 ctcaatggat ctcggagcgc cgcagtgctc tgaggagaag agagcaggct
1101 aatagcttgc agggtcttgc tgctcaaact gacatgacat ttgagcaggc
1151 caggaatgcg tatcttggtg ctgctgatat gattgagcaa ggcctaccat
1201 tattgcctcc actgagaaat gcctatgcac ctcgtggtct atggagggga
1251 ccttccacca gagccaacta cactttggat tttaggctca atggaattcc
1301 cacgggacaa aatactctag aaatattgta taatcccgtg gcagacgagg
1351 agatggatga ctaccgtgac aggggtatgt cagcagtcgt gattgatgcg
1401 ctagaaatcg ctattaatcc ttttggaatg ccaggcaatc cgactgatct
1451 tactgtcgta gcaacatatg ggcacgagcg taatatggaa cgtgccttca
1501 ttggttcttc ttcaaccttt cttggaaatg ggttggcgag agccattttc
1551 tttcctggtt tacagtatag ccaggaggaa cctaggcgcg aatctttgat
1601 tcgtctttat gttgcctcta caaacgccac tgtcgatgct gattctatat
1651 tagcagccat tagtgtaggt actttacgcc agcacattgg ttcgcttcac
1701 aatagaacgg tggcgagttc tgtacatcgt gcgcaatggc agggcactac
1751 tttgagagct actatgatgg gtaatgccgt cgtggtttct cctgaaggaa
1801 gtcttgttgc tggaacccct gaagctaatg tccaaattgg gggtggttcc
1851 agtatgcgca tggtaggtcc cctggcatgg gaaaatgttg aagaaccagg
1901 gcagaccttt actataagaa accgctcccg atctatgcga gtagatcgga
1951 atgctgatgt tggagttgct cttcctagaa tgagtacaac aacgcggggt
2001 cttgctggta gggattctgt tcaggtgcct aaagattgcc aagcgggaaa
2051 atacttgaaa acccttgacc ttagagaaat ggtaagcggg ttttcaggta
2101 ttcagtatga gaagtggatc actgctggaa ttgtaatgcc agatttcaaa
2151 gtggtgattc gctatccagc caatgccttt acaggtatta cgtgggttat
2201 gagttttgat gcttacaacc gaattactag tagtatttca actactgcta
2251 gtcccgcgta tacactgtcc gtccctcatt ggcttttgca ccataaaaat
2301 gggacgacct catgtgattt ggactatggg gaactttgtg gacatgcgat
2351 gtggtttgga gccacaactt ttgaaagtcc caaacttcat ttcacgtgcc
2401 tcactggaaa taacaaagag ttggcagcgg attgggagtt cgttgtcgaa
2451 ttatatgctg agtttgaggc agcaaagagt tttcttggga agcccaactt
2501 catttatagc gctgacgctt ttaatgggtc tctcaagttt ctgactatcc
2551 caccactgga atatgactta agtgcaacca gtgcctacaa gagtgtgtcc
2601 ctgttattgg ggcagactct tgttgacggt actcataagg tgtataattt
2651 taataataca ctcttgagtt actatttagg cattgggggt attgtcaagg
2701 gaaaggtgca tgtttgtagc ccttgcactt atggcatagt cctaagagtt
2751 gttagtgaat ggaacggggt cactaacaac tggaatcaac tgtttaaata
2801 ccccgggtgt tacatcgagg aggatgggag ctttgctatt gaaatacgct
2851 ccccctacca ccgaactcca cttcgcttaa ttgacgcgca atcagcaagc
2901 tcttttacga gtacgttgaa tttttacgca atctcagggc ccatagcccc
2951 aagtggagaa acagcgaaga tgccagtagt cgtgcaaatt gaagaaatcg
3001 cacttccggg tctttctgtg ccatccttcc ccaatgatta tttcctttgg
3051 gttgactttt catcattcac tgtggatgtt gaagagtatg tgatagggtc
3101 gaggtttttc gatatttcct ctactactag cactgtagcc cttggagaca
3151 atccttttgc ccatatgata gcttgtcatg gactccatca tggaatcctt
3201 gatcttaagt taatgtggga tttggagggt gagtttggaa agagtgctgg
3251 tggtgttacc atcacgaaat tgtgtggtga taaggccact ggcatggatg
3301 gagcatctcg tgtttgtgct ttacaaaaca tggggtgtga aactgagcta
3351 tacataggga attatgcggg tgctaaccca aatactgcat tatccttgta
3401 tagtcgatgg cttgctatta agcttgataa agctaagagc atgaaaatgc
3451 ttagaatttt gtgcaagcct cgagggaatt tcgaatttta tggccggacg
3501 tgctttaaag tttaaattcc ctcccgtgtc tcgggaatct gacgttaaaa
3551 gacccaattt gcgatatatt tatatttagc ttgtttactg ctttagtgtg
3601 tttaatttca tgcttatagt ggcgacagtg tgttgtttgt cctttggaca
3651 cgcttgcctt gttggacata aaaagatttt tcttttcttt ttactgcttt
3701 tgtaactata t