Sequence of DPV Thogoto virus
Thogoto virus genomic RNA for nucleoprotein
ACC No: X96872
Dated: 2003-03-26 | Length: 1418 | CRC: 1289694037
!!NA_SEQUENCE 1.0
ID TVRNAS5 standard; genomic RNA; VRL; 1418 BP.
XX
AC X96872;
XX
SV X96872.1
XX
DT 20-NOV-1996 (Rel. 50, Created)
DT 26-MAR-2003 (Rel. 75, Last updated, Version 4)
XX
DE Thogoto virus genomic RNA for nucleoprotein
XX
KW nucleoprotein; RNA-binding protein.
XX
OS Thogoto virus
OC Viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Thogotovirus.
XX
RN [1]
RX MEDLINE; 97126032.
RX PUBMED; 8970956.
RA Weber F., Haller O., Kochs G.;
RT "Nucleoprotein viral RNA and mRNA of Thogoto virus: a novel cap-stealing
RT mechanism in Tick-borne Orthomyxoviruses?";
RL J. Virol. 70(12):8361-8367(1996).
XX
RN [2]
RP 1-1418
RA Weber F.;
RT ;
RL Submitted (25-MAR-1996) to the EMBL/GenBank/DDBJ databases.
RL F. Weber, Inst.Med.Microbiology and Hygiene, Department of Virology,
RL Hermann-Herder-Str. 11, D-79008 Freiburg, FRG
XX
FH Key Location/Qualifiers
FH
FT source 1. .1418
FT /db_xref="taxon:11569"
FT /mol_type="genomic RNA"
FT /organism="Thogoto virus"
FT /clone_lib="lambda ZAP Express"
FT /clone="pBK-L3"
FT /lab_host="hamster"
FT /strain="SiAr 126"
FT /segment="5"
FT CDS 21. .1385
FT /db_xref="GOA:P89216"
FT /db_xref="UniProt/Swiss-Prot:P89216"
FT /product="nucleoprotein"
FT /function="RNA binding"
FT /protein_id="CAA65616.1"
FT /translation="MATDQMDISGPPPKKQHVDTESQIPKMYEMIRDQMRTLASTHKIP
FT LNIDHNCEVIGSIIMAACTNNRDLRPVDKYWFLMGPAGAEVMTEVEIDIQPQLQWAKGA
FT VHDPKYKGQWYPFLALLQISNKTKDTILWQKYPVTQELEISNSLEIYANGHGIKDRLKN
FT SRPRSVGPLVHLLHLKRLQENPPKNPKTKKPLESPAVNGIRKSIVGHLKRQCIGETQKA
FT MINQFEMGRWESLSTFAASLLAIKPRIENHFVLTYPLIANCEDFAGATLSDEWVFKAME
FT KISNKKTLRVCGPDEKWISFMNQIYIHSVFQTTGEDLGVLEWVFGGRFCQRKEFGRYCK
FT KSQTKVIGLFTFQYEYWSKPLKSAPRSIEGSKRGQISCRPSFKGKRPSYNNFTSIDALQ
FT SASGSQTVSFYDQVREECQKYMDLKVEGTTCFYRKGGHVEVEFPGSAHCNTYLFG"
XX
SQ Sequence 1418 BP; 413 A; 365 C; 353 G; 287 T; 0 other;
X96872 Length: 1418 June 22, 2004 14:38 Type: N Check: 1744 ..
1 agcaaaaaca ggcagtcaaa atggctacag accagatgga catctcgggc
51 cctcctccaa agaaacagca tgtggacaca gagagtcaga tcccaaagat
101 gtacgagatg atcagggacc agatgcgcac tttggcatcg acacacaaaa
151 tccccctgaa cattgaccac aactgcgagg ttatcgggtc catcataatg
201 gctgcctgta caaacaacag agacctgaga ccagtggata agtactggtt
251 tctaatgggc cctgcagggg cggaagttat gaccgaagtg gagattgaca
301 ttcaaccaca acttcaatgg gcaaaaggag ctgtccatga cccgaaatac
351 aaggggcaat ggtatccatt ccttgcactt ctacagatct ccaacaagac
401 caaagatacc atcttgtggc agaaataccc cgtcacccag gagctagaga
451 ttagcaactc ccttgagatc tacgccaacg gtcacggcat caaagaccgg
501 cttaagaaca gcaggcccag gtctgtcggg cctctcgtcc accttctcca
551 cttgaagagg ctccaagaaa atccaccaaa gaaccccaaa acaaagaagc
601 ccttagaatc ccctgctgtc aatgggatac ggaagagcat cgtcgggcac
651 ctcaagcgcc aatgcatcgg tgagacccaa aaggcaatga tcaaccagtt
701 tgagatgggg aggtgggagt ctctatccac atttgctgcc tctctgctgg
751 caataaagcc tcggatcgag aaccacttcg tgctgacgta cccactgata
801 gccaactgcg aggattttgc cggggcaacg ctgtctgacg agtgggtgtt
851 taaggcgatg gagaagatct cgaacaagaa aacactacga gtttgcgggc
901 cagatgagaa gtggatcagc ttcatgaacc agatctacat ccacagtgta
951 ttccagacca caggcgaaga tctgggagtt ttagagtggg tgttcggagg
1001 caggttctgc cagaggaagg aatttggccg gtactgcaag aagtctcaaa
1051 ccaaggtcat cgggctgttc accttccaat acgagtactg gtcaaagcct
1101 ctgaagtctg ccccaagatc gatagaaggg tcaaaaaggg gccagatctc
1151 gtgcagacct tctttcaaag gaaagcgccc ctcttacaac aatttcacca
1201 gcatagacgc cctgcagtct gcctctgggt ctcaaaccgt cagcttctat
1251 gatcaagtca gagaagaatg ccagaagtac atggacctaa aagtggaggg
1301 gacaacctgc ttctaccgaa agggcggcca tgtagaggtg gaattccctg
1351 ggagcgccca ctgcaacaca tacctgttcg gttgattttt gtttccaaaa
1401 aactgccttg atttctct