Sequence of DPV Plum pox virus
Plum pox potyvirus gene encoding polyprotein for partial NIa protein, NIb protein and coat protein
ACC No: X97398
Dated: 1998-01-23 | Length: 2781 | CRC: 1510794716
!!NA_SEQUENCE 1.0
ID PPPCPGENE standard; RNA; VRL; 2781 BP.
XX
AC X97398;
XX
SV X97398.1
XX
DT 25-APR-1996 (Rel. 47, Created)
DT 23-JAN-1998 (Rel. 54, Last updated, Version 15)
XX
DE Plum pox potyvirus gene encoding polyprotein for partial NIa protein, NIb
DE protein and coat protein
XX
KW coat protein; NIa protein; NIb protein; polyprotein.
XX
OS Plum pox virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RA Nemchinov L., Hadidi A., Maiss E., Cambra M., Candresse T., Damsteegt V.;
RT "Sour cherry strain of plum pox potyvirus (PPV):molecular and serological
RT evidence for a new subgroup of PPV strains";
RL Phytopathology 86:1215-1221(1996).
XX
RN [2]
RC Revised by [3]
RA Nemchinov L.G.;
RT ;
RL Submitted (22-APR-1996) to the EMBL/GenBank/DDBJ databases.
RL L.G. Nemchinov, USDA/ARS/NGRL, BARC-WEST Bldg.011a Room 106, Beltsville,
RL MD, 20705, USA
XX
RN [3]
RP 1-2781
RA Nemchinov L.G.;
RT ;
RL Submitted (23-JAN-1997) to the EMBL/GenBank/DDBJ databases.
RL L.G. Nemchinov, USDA/ARS/NGRL, BARC-WEST Bldg.011a Room 106, Beltsville,
RL MD, 20705, USA
XX
DR SPTREMBL; Q84923; Q84923.
XX
CC Related sequences: X16415 and D13751
XX
FH Key Location/Qualifiers
FH
FT source 1. .2781
FT /db_xref="taxon:12211"
FT /organism="Plum pox virus"
FT /strain="sour cherry"
FT /isolate="PPV-SoC"
FT /specific_host="Prunus cerasus"
FT /clone="PPVSoc-1360"
FT CDS <1. .2564
FT /codon_start=3
FT /db_xref="SPTREMBL:Q84923"
FT /product="polyprotein"
FT /protein_id="CAA66055.1"
FT /translation="YTQSKTTHWLRDKLEGNLKAVGACPGQLVTKHVVKGKCTLFETYL
FT LTHPDERAFFQPLMGAYQKSALNKDAYVKDLMKYSKPIVVGTVDCEQFERAVNAVISML
FT ISKGFEECCYVTDPDDIFAALNMKAAVGALYSGKKRDYFENVSEDEKYEFVRASCKRLF
FT MGQKGVWNGSLKAELRPKEKVEANKTRSFTAAPIDTLLGGKVCVDDFNNQFYSLNLHCP
FT WSVGMTKFRGGWDKLLRSLPDGWIYCDADGSQFDSSLSPYLINAVLNIRLAFMEKWDIG
FT EQMLSNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTVVDNTLMVILAMTCSLLKLGYH
FT PDTHDCICKYFVNGDDLVIAVHPSHEHIYDELQELFSQLGLNYTLTAKTENKEELWFMS
FT HKGVLHDGMYIPKLEPERIVSILEWDRSHEPIHRLEAICASMVEAWGYGDLLMEIRKFY
FT SWVLEQAPYNALSKDGKAPYIAETALKKLYTDEEASETEIEKYLEAFYNNAGDELGSNI
FT VVHQAKEGNDDDVTLVDAGKSTVTTAASTPAVTSSQFPPPPFPNLQSAAPMFDPIFTPA
FT TTQPNVRPIAPVVTSPFSYGVIGNQNVTPSSSNALVNTRKDRDVDAGTIGTFSVPRLKS
FT MTSKLSLPKVRGKAIMNLSHLAHYNPAQTDLSNTRAPQSCFQTWYEGVKRDYDVSDDEM
FT SIILNGLMVWCIENGTSPNINGMWVMMDGETQVEYPIKPLLDHAKPTFRQIMAHFSNVA
FT EAYIEKRNYEKAYMPRYGIQLNLTDYSLARYAFDFYEMTSTTPVRAREAHIQMKAAALR
FT NVQNRLFGLDGNVETQEEDTERHTAGDVNRNMHNLLGVRGV"
FT mat_peptide <1. .11
FT /product="NIa protein"
FT mat_peptide 12. .1565
FT /product="NIb protein"
FT mat_peptide 1566. .2561
FT /product="coat protein"
FT 3'UTR 2565. .2781
XX
SQ Sequence 2781 BP; 816 A; 580 C; 678 G; 707 T; 0 other;
X97398 Length: 2781 December 21, 2001 16:04 Type: N Check: 6243 ..
1 tctatactca atccaagaca acgcactggt tacgcgacaa gctggaaggc
51 aatttgaagg cggttggagc ctgtccagga cagctggtta cgaagcacgt
101 agtgaaggga aagtgcacac tgttcgaaac ctacttgctg acacacccag
151 atgagcgcgc attcttccag ccgttgatgg gggcctatca gaaaagtgct
201 ctaaataagg atgcctacgt aaaggatctg atgaagtatt ccaagcccat
251 agttgttggg actgtcgatt gcgagcaatt tgagcgtgcg gtgaatgcgg
301 tcatttcaat gttgatttca aaaggtttcg aggagtgttg ttacgttaca
351 gatccagatg acatattcgc agcactaaat atgaaggcag cagttggggc
401 actttacagt gggaagaaaa gagattactt tgagaatgtg tctgaagatg
451 aaaaatatga atttgtgcgt gccagctgta aacgtctatt tatggggcag
501 aaaggagtct ggaacggatc actcaaagct gagttgcgac caaaggagaa
551 agtcgaagct aacaaaacgc gctcattcac ggcagcaccc attgacactc
601 ttctcggagg taaagtgtgc gtagacgact tcaacaatca gttctacagc
651 ctgaatttgc actgtccttg gagtgttgga atgacaaaat tcagaggtgg
701 atgggacaag ctgctaaggt cgttgccaga tggctggatt tactgtgatg
751 ccgatggctc acaatttgac agctccttgt caccatatct cattaatgca
801 gtgctgaaca ttcggttagc tttcatggaa aaatgggaca ttggtgaaca
851 aatgttatcc aacttgtaca ccgagattgt ttacacacca atagcaaccc
901 cggacggaac cattgtcaag aagttcaaag gaaataatag tggacaacca
951 tccacagtcg tagataatac gctcatggtc attctagcaa tgacatgctc
1001 gcttttgaag cttggatacc atccagacac acacgactgt atttgcaagt
1051 actttgtgaa tggtgatgac ttagttatag cggttcatcc gtcgcatgag
1101 cacatttatg atgagcttca agagttattt tcccagctcg gattgaacta
1151 cacactcaca gcgaaaaccg agaacaaaga ggagctatgg ttcatgtctc
1201 acaaaggtgt attgcatgat gggatgtaca tcccgaagtt ggaacctgaa
1251 aggatagtgt caatacttga gtgggatagg tcacatgaac caattcacag
1301 attggaggca atttgtgcat cgatggttga agcttggggt tatggagatc
1351 tgttgatgga aattcgaaaa ttttatagct gggttcttga acaggcaccg
1401 tacaatgccc tgtcgaaaga tggaaaagcc ccatacattg cagagactgc
1451 tctgaaaaag ttgtacacag atgaagaagc ttctgagaca gagattgaga
1501 aataccttga agccttctat aacaatgctg gggatgagct cggttccaac
1551 atagtggtgc atcaggccaa ggagggaaat gatgacgacg taactctagt
1601 ggatgcaggc aagtcaactg tcaccacagc agcttccacg cctgcagtaa
1651 caagctcaca atttccacct ccaccattcc caaatctgca gagcgcggca
1701 ccaatgtttg atcccatatt cactccagca acaacccagc caaatgtgag
1751 accgattgca ccagtagtga caagtccatt ctcgtatggg gtaattggga
1801 accagaacgt gacaccttcc tcctcaaatg cactagtcaa cacgaggaag
1851 gatcgagatg tagatgcagg aacgattggg accttctcag tacctcgact
1901 taagtctatg acttcgaaat tatcactccc gaaggtgaga gggaaggcca
1951 tcatgaacct cagtcatttg gctcattata atcctgcaca aactgactta
2001 tcaaacacgc gggctcctca atcttgtttc caaacttggt atgaaggagt
2051 caagcgagac tacgatgttt cggatgatga gatgagcatt attttgaatg
2101 gtttgatggt gtggtgcatt gaaaatggaa cctctccaaa catcaatggg
2151 atgtgggtta tgatggatgg agagacacaa gtggagtatc caataaagcc
2201 attgttggat catgcgaaac ccacttttag acaaattatg gcacatttca
2251 gtaacgtcgc tgaagcgtat attgaaaagc ggaactatga gaaagcatac
2301 atgccaaggt atggaattca gctcaacctg acagactaca gcctcgccag
2351 atatgccttt gatttctacg agatgacctc gacaacgcct gtgagggctc
2401 gtgaggcaca tattcaaatg aaggcagcag cattgagaaa tgttcaaaat
2451 cgtttatttg gcttggatgg aaacgtcgaa acacaagaag aggacacaga
2501 gaggcacacc gctggtgatg ttaatcgcaa catgcacaac ctcctcggtg
2551 tgaggggagt gtagtggtct cggtatccat cataaactct acttgggtga
2601 gagtctagtc atccaactgt ttttagattc ctgttagcat ccttttcttt
2651 gctttaatag cagtacatcc agtgaggttt tacctccata tgtcctagtc
2701 tgttattgtc gaacacaggc ccttgtatct gatgtagcga gtgtttcact
2751 ccattcgggt tatagttctt gtgcaagaga c