Sequence of DPV Tomato mosaic Havana virus
Tomato mosaic Havana virus-[Quivican] DNA, segment A
ACC No: Y14874
Dated: 2005-04-18 | Length: 2620 | CRC: 1651139342
!!NA_SEQUENCE 1.0
ID HTVDANCA standard; genomic DNA; VRL; 2620 BP.
XX
AC Y14874;
XX
SV Y14874.1
XX
DT 04-SEP-1998 (Rel. 56, Created)
DT 18-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE Tomato mosaic Havana virus-[Quivican] DNA, segment A
XX
KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene.
XX
OS Tomato mosaic Havana virus-[Quivican]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RA Martinez-Zubiaur Y., de Blas C., Quinones M., Castellanos C., Peralta E.L.,
RA Romero J.;
RT "Havana tomato virus, a new bipartite geminivirus infecting tomatoes in
RT Cuba";
RL Arch. Virol. 0:0-0(0).
XX
RN [2]
RP 1-2620
RA Romero L.C.;
RT ;
RL Submitted (19-SEP-1997) to the EMBL/GenBank/DDBJ databases.
RL L.C. Romero, Instituto Nacional de Investigaciones, Agrarias Centro de
RL Investigacion y, Technologia Area de Biologia Molecular, y Virologia
RL Vegetal, Autopista A-6 Km7,5 28040 Madrid, Spain
XX
FH Key Location/Qualifiers
FH
FT source 1. .2620
FT /db_xref="taxon:223357"
FT /mol_type="genomic DNA"
FT /note="segment A"
FT /organism="Tomato mosaic Havana virus-[Quivican]"
FT /strain="Quivican"
FT CDS 344. .1099
FT /db_xref="GOA:O91197"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/TrEMBL:O91197"
FT /gene="AV1"
FT /protein_id="CAA75134.1"
FT /translation="MPKRDLPWRSMAVTSKVSRNANCSPRSGIGPKYNKAAEWVNRPMY
FT RKPRIYRTLKSPDVARGCESPCKVQSYEQRHDISHVGKVMCISDGTRGNGITHRVGKRF
FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT KNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENAL
FT LLYMACTHASNPVYATLKIRIYFYDSIMN"
FT CDS complement(1241. .1630)
FT /db_xref="GOA:O91198"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProt/TrEMBL:O91198"
FT /gene="AC2"
FT /protein_id="CAA75135.1"
FT /translation="MRSSSPSHPPSIKIAHRQAKKKTIRRRRIDLECGCSIYFHIDCAG
FT HGFPHRGYHHCTSGREWRVYLGDRKSPLFQDIQSRGTTVQQEQSVPHTNQVQPQPEESV
FT ASPQSLPELPSVDDIDDSFWVNLFS"
FT CDS complement(1096. .1494)
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProt/TrEMBL:O91199"
FT /gene="AC3"
FT /protein_id="CAA75136.1"
FT /translation="MDSPTGDIITARQAENGVYIWEIENPLYFKIYRVEEPLYSRSRVY
FT HIQIRFNHNLRRALHLHKAFLNFQVWTTSMTASGSTYLARFRHLVIVYLDQLGVISLNN
FT VIRAVRFATDRHYVHDVLENHSIKFKFY"
FT CDS complement(2213. .2470)
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProt/TrEMBL:O91200"
FT /gene="AC4"
FT /protein_id="CAA75137.1"
FT /translation="MGSLISMCFCSSKPNTSARIADSSTWSPHPGQHISIRTYRELSRA
FT PTSRHTSTRTEMRQNGGNSRSTVDLLEEAASRPTIHMQRH"
FT CDS complement(1542. .>2620)
FT /codon_start=3
FT /db_xref="GOA:O91201"
FT /db_xref="HSSP:1L5I"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProt/TrEMBL:O91201"
FT /gene="AC1"
FT /protein_id="CAA75138.1"
FT /translation="PKKFRVNSKNYFLTYPQCSITKEEALSQIKNLNTPVNKKFIKICR
FT ELHENGEPHLHVLLQFEAKYQCTNSRFFDLVSPSRSAHFHPNIQGAKSSSDVKAYIDKD
FT GDATEWGEFQIDGRSARGGCQSANDTYAKALNASCAEEALQIIKEQQPQHFFLHHHNLV
FT ANAQRIFHKPPEPWVPPFHLSSFTDVPEEMQKWADDYFGRGSAARPDRPISIIVEGDSR
FT TGKTMWARALGPHNYLMGHLDFNSRVYSNAVEYNVIDDVAPHYLKLKHWKELLGAQRDW
FT QSNCKYGKPVQIKGGIPAIVLCNPGEGSSYKDFLNKEENTALRNWTIKNALFITLTSAL
FT YQDSSQASKEEDNQEKAD"
XX
SQ Sequence 2620 BP; 645 A; 574 C; 614 G; 787 T; 0 other;
Y14874 Length: 2620 May 10, 2005 10:10 Type: N Check: 6506 ..
1 gtggcatttt tgtaatttag aggtgtacac caattgagct ctctcaaact
51 tgctgattca attggtgtat tggggtaact tatatactag aaccctctat
101 agaactatta atcttgttcc tacacgtggc ggccatccgt ataatattac
151 cggatggccg cgcgcccttt tctctttccg tacaattggt agcgcatcct
201 ttttctttat ttctctcttt aatttaaatt cgtccaatca tgttacgtct
251 gacgagctta tgtacattca acaacttggg cctcaagttg ttgggcctgg
301 gttataaatt aaagagagtt tggcccaata gtgttaatcc aaaatgccta
351 agcgtgattt gccatggcgt tctatggcgg taacctcaaa ggttagccgc
401 aacgctaatt gttctcctcg gtcaggtatt gggccaaaat acaacaaggc
451 cgctgaatgg gttaacaggc ccatgtaccg gaagcccagg atctatcgga
501 ctctgaagag tcctgatgtt gccagaggtt gtgaaagccc ttgtaaagtc
551 cagtcttacg aacagcgcca tgacatctca catgtgggca aggtcatgtg
601 catatctgac gggacacgtg gtaatggtat tactcatcgt gtgggaaagc
651 gtttctgtgt gaagtctgtg tacatactag ggaagatctg gatggacgag
701 aatatcaagc tgaaaaacca cacgaacagc gtcatgttct ggttggttag
751 agataggaga ccctatggga cgcccatgga ttttggtcaa gtgttcaaca
801 tgttcgacaa cgagcccagt acagccactg tgaagaacga tcttcgtgat
851 cgttaccagg tcatgcacaa gttctatggc aaggtgaccg gtggtcagta
901 tgccagcaac gaacaggcta tcgtgaagcg gttctggaag gtgaacaacc
951 acgtggtcta caatcaccaa gaggctggca aatacgagaa tcatactgag
1001 aacgccctac tattgtacat ggcatgtact catgcctcta accctgtata
1051 tgcaactctg aagatccgga tctattttta tgattcgatc atgaattaat
1101 aaaatttgaa ttttattgaa tgattctcta atacatcgtg tacataatgt
1151 ctatctgttg caaaacgtac agctctaatt acattgttca atgaaattac
1201 acctaattga tctaaataca cgataactaa atgtctaaac ctagctaaat
1251 aagttgaccc agaagctgtc atcgatgtcg tccacacttg gaagttcagg
1301 aaggctttgt ggagatgcaa cgctctcctc aggttgtggt tgaacctgat
1351 ttgtatgtgg tacactctgc tcctgctgta cagtggttcc tctactctgt
1401 atatcttgaa atagagggga ttttctatct cccagatata cacgccattc
1451 tctgcctgac gtgcagtgat gatatcccct gtgggggaat ccatgtccag
1501 cgcagtctat gtggaagtaa atggagcaac cgcactccag atcaatccgc
1551 cttctcctga ttgtcttctt ctttgcttgc ctgtgagcta tcttgataga
1601 gggcggatgt gagggtgatg aagagcgcat tcttgatagt ccagttcctg
1651 agtgctgtgt tttcctcttt gttcaggaaa tctttatagc tggagccctc
1701 acctggattg caaagcacga ttgctgggat cccaccttta atttgaactg
1751 gcttgccgta cttgcaattt gactgccagt ctctctgggc ccccagcaat
1801 tctttccagt gctttagctt tagatagtgc ggtgcgacgt catcaatgac
1851 gttatactcc actgcatttg aatagactcg agaattgaaa tccaaatggc
1901 ccatgagata attatgtgga cccagtgcac gtgcccacat tgtcttccct
1951 gttctcgagt ctccttcaac tatgatacta ataggtctat ctggccgcgc
2001 agcggaaccc cttccaaaat aatcgtctgc ccatttttgc atttcttccg
2051 ggacgtctgt gaaagaagac agatgaaatg gagggaccca tggttccggt
2101 ggtttgtgga agatcctttg tgcatttgcg accaggttat ggtgatggag
2151 gaagaaatgt tgaggctgct gttcttttat tatttgtaga gcctcttctg
2201 cacatgaggc attcaatgcc tttgcatatg tatcgttggc cgactggcag
2251 cctcctctag cagatcgacc gtcgatctgg aattcccccc attctgtcgc
2301 atctccgtcc ttgtcgatgt atgccttgac gtcggagctc gacttagctc
2351 cctgtatgtt cggatggaaa tgtgctgacc gggatgggga gaccaggtcg
2401 aagaatctgc tattcgtgca ctggtatttg gcttcgaact gcaaaagcac
2451 atggagatga ggctccccat tttcatgaag ctctctgcag atcttgatga
2501 acttcttgtt aactggagtg tttaggtttt ttatttggga aagtgcctct
2551 tctttggtaa tggagcactg tggataagtg aggaaatagt ttttagagtt
2601 aactctaaat ttctttggtg