Sequence of DPV Potato virus X
Potato virus X coat protein RNA and 3 ORF's, complete CDS's
ACC No: Z23256
Dated: 1993-12-01 | Length: 6433 | CRC: 530872686
!!NA_SEQUENCE 1.0
ID PVCOAPRA standard; RNA; VRL; 6433 BP.
XX
AC Z23256;
XX
SV Z23256.1
XX
DT 24-NOV-1993 (Rel. 37, Created)
DT 01-DEC-1993 (Rel. 38, Last updated, Version 3)
XX
DE Potato virus X coat protein RNA and 3 ORF's, complete CDS's
XX
KW coat protein.
XX
OS Potato virus X
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potexvirus.
XX
RN [1]
RP 1-6433
RX MEDLINE; 94025577.
RA Goulden M.G., Kohm B.A., Santa Cruz S., Kavanagh T.A., Baulcombe D.C.;
RT "A feature of the coat protein of potato virus X affects both induced virus
RT resistance in potato and viral fitness";
RL Virology 197:293-302(1993).
XX
RN [2]
RP 1-6433
RA Baulcombe D.C.;
RT ;
RL Submitted (05-JUL-1993) to the EMBL/GenBank/DDBJ databases.
RL DAVID C BAULCOMBE, THE SAINSBURY LABORATORY, NORWICH RESEARCH PARK COLNEY,
RL NORWICH, NORFOLK, NR4 7UH, UNITED KINGDOM
XX
DR SPTREMBL; Q85198; Q85198.
DR SPTREMBL; Q85199; Q85199.
DR SPTREMBL; Q85200; Q85200.
DR SPTREMBL; Q85201; Q85201.
DR SPTREMBL; Q85202; Q85202.
XX
FH Key Location/Qualifiers
FH
FT source 1. .6433
FT /db_xref="taxon:12183"
FT /organism="Potato virus X"
FT /strain="HB"
FT /clone="pTHS"
FT /isolate="HARPENDEN ISOLATE"
FT CDS 85. .4455
FT /db_xref="SPTREMBL:Q85198"
FT /function="replicase component"
FT /product="165kDa protein"
FT /protein_id="CAA80774.1"
FT /translation="MAKVREVYQSFTDSTTKTLIQDEAYRNIRPIMEKHKLSNPYAQTV
FT EAANDLEGFGIATNPYSIELHTHAAAKTIENKLLEVLGSLLPQEPVTFMFLKPRKLNFM
FT RRNPRIKDIFHNVAIEPRDVARYPKETIIHKLAEIKTDTAYISDTLHFLDPSYIVETFQ
FT NCPKLQTLYATLVLPVEAAFKMESTHPNIYSLKYFGDGFQYIPGNHGGGAYHHEFSHLQ
FT WLKVGKIKWHDPKDGLLGHLNYTHEQVDTHTVTVQLQESFAANHLYCIRRGNMMTPEVR
FT TFGQPDRYVLPPQIFLPKVHNCKKPILKKTMMQLFLYVRTVKAAKNCDIFAKVRQLIKS
FT SDLDKFSAVELVYLVSYMEFLAALQATTCFSDTLSGGLLTKTLAPVRAWIQEKKMQLCG
FT LEDYAKLVKAVDWRPVDFSFKVETWDFRFHPLGMWKAFQPSELSDVEEMNNFFDDGDLL
FT DCFTRMPAYAVNAEEDLAGMRGDNQGETSTAPREPEGDKKEYVNPAETFLDKLTRKHNR
FT ETKSRAAKKAKRLAEIQDSINRDQTEEESQGAPNMGEAPSNAELPGTNGAGAGTTFPTL
FT EALPQKWEDASFTDSSMTDQMEIMPGKEAVEVATQKVVDELPWKHWLPQLNAVGFKALE
FT IQRDRNGTMIMPITEMVFGLDKEEFPEGTPEALARELKAMNRSPTTIPLDLLRARDYGS
FT DVKNKRIGAITKTQAASWGEYLTGKIESLPERKVAACVIHGAGGSGKSHAIQKALREIG
FT KGSDITVVLPTNELRLDWSKKVPNTEPYMFKTYEKALIGGTGSIVIFDDYSKLPPGYIE
FT ALVSFSTKIKLIILTGDSRQSVYHETSDDASIRHLGPATEVFAKYCRYYLNATHRNKKD
FT LANMLGVYSERTGTTEISMSSEFLEGVPTLVPSDEKRKLYMGTGRNDTFTYAGCQGLTK
FT PKVQIVLDHNTQVCSANVMYTALSRATDRIHFINTSANSSAFWEKLDSTPYLKTFLSVV
FT REQALREYEPVEAEPIREPEPQTHMCVENEESVLEEYKEELLEKFDREIHSEAHGHSNC
FT VQTENTTVQLFSHQQAKDETLLWATIDARLKTSNQESNFREFLSKRDIGDVLFLNYQRA
FT MGLPKEPIPFSQEVWEACAHEVQSKYLSKSKCNLINGTVRQSPDFDENKIMVFLKSQWV
FT TKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPKEVFINCETTPEDMS
FT AWALSNWNFTRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEIIQAYIDIKTNAQI
FT FLGTLSIMRLTGEGPTFDANTECNIAFTHTKFDIPAGTAQVYAGDDSALDCVPEIKQSF
FT HRLEDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLKLAEAKGELKKC
FT QDSYEIDLSYAYDHKDSLHDLFDEKQCQAHTLTCRTLIKSGRGTVSLPRLRNFL"
FT CDS 4486. .5166
FT /db_xref="SPTREMBL:Q85199"
FT /function="movement"
FT /product="25kDa protein"
FT /protein_id="CAA80775.1"
FT /translation="MDILIISLKSLGYSRTPRPLDSGPLVVHAVAGAGKSTALRKLLAR
FT HSTFTIHTLKIPDKISIRTRGIQKPGPIPKGNFAILDEYTLDATTREAYQALFADPYQA
FT PELSLEPHFYLETSFRTPKKAAALIASCGFDFETNSQEEGHLEVTGIFKGPLLGKVIVI
FT DSEAETTLSRHGVEFVKPCQVTGLEFPVVTIVSAAPIEEIGQSTLFYNAITRSKGLTYV
FT RAGT"
FT CDS 5147. .5494
FT /db_xref="SPTREMBL:Q85200"
FT /function="movement"
FT /product="12kDa protein"
FT /protein_id="CAA80776.1"
FT /translation="MSAQGHRLTAPVNSEKVYIVLGLSFALISITFLLSRNNLPHVGDN
FT IHSLPHGGAYRDGTKAILYNSPNFGSRTSLNNSKNAAFAAVLLLSLLIYGSRCLSQRNH
FT LCACGNNHSSN"
FT CDS 5427. .5642
FT /db_xref="SPTREMBL:Q85201"
FT /function="movement"
FT /product="8kDa protein"
FT /protein_id="CAA80777.1"
FT /translation="MEAGAYLNAIIFVLVATIIAVISVGLTQTEPCTMRITGESITVHA
FT CHLDSETIKALATLKPLSLERLSFHQ"
FT CDS 5650. .6360
FT /db_xref="SPTREMBL:Q85202"
FT /product="coat protein"
FT /protein_id="CAA80778.1"
FT /translation="MTTPANTTQAVGSTTSTTTTTAGATPANSGLFTIPDGDFFSTAKA
FT VVASNAVATNEDLTKIQKIWKDMKIPSDTMAQAAWDLVRHCADVGSSAQTEMIGTGPYS
FT NGVSRARLAAAIKEVCKLRQFCRKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFDF
FT FDGVTNPAAITPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRIT
FT GTTAAEAVISLPPP"
XX
SQ Sequence 6433 BP; 1933 A; 1626 C; 1502 G; 1372 T; 0 other;
Z23256 Length: 6433 December 21, 2001 16:06 Type: N Check: 0 ..
1 gaaaactaaa ccaaacacca ccaacacaac caaacccacc acgcccaatt
51 aacacacacc cacttgaaaa agtaagtctg ttaaatggcc aaagtgcgcg
101 aggtttacca atcattcact gactccacca caaagactct tatccaagat
151 gaggcgtacc gtaacatacg tcccattatg gagaaacaca agttatccaa
201 cccatacgct cagaccgtcg aagcagccaa cgatcttgaa ggatttggca
251 tagccacaaa cccttacagc atcgagttac atacacatgc ggctgccaag
301 acgatcgaga acaaactcct agaagtactg ggctccctcc taccgcaaga
351 acctgttact tttatgttcc tcaaacccag aaagctaaat ttcatgagga
401 gaaaccccag gatcaaagac attttccaca atgtcgctat tgaaccaaga
451 gatgttgcta gatacccaaa ggaaaccatc atacacaaac tagcggagat
501 taagacggac acagcgtata tcagtgatac tctacacttt ctcgacccga
551 gttatattgt ggagacattc cagaactgtc cgaaactcca aacactctat
601 gccacactcg tcctaccagt agaggccgct ttcaaaatgg agagtactca
651 tccaaacatc tacagcctca agtactttgg cgatggcttc cagtacatac
701 cgggcaacca tgggggagga gcttaccacc atgaattcag ccacttgcag
751 tggctaaaag ttggtaagat caagtggcac gatcctaagg atggcttgct
801 cggacacctc aactatacac atgagcaagt tgatacacac acggtgactg
851 tacagctcca agagtctttt gcagcaaatc acctgtactg catcaggaga
901 ggaaatatga tgacgccaga ggtgcgtacg tttggacagc cagacagata
951 tgtactgcca ccacaaatat tcctcccaaa agtacacaat tgcaagaaac
1001 ctatccttaa aaagactatg atgcaacttt tcttgtacgt caggacggtc
1051 aaagctgcaa agaactgcga catatttgcc aaggtaaggc agttaataaa
1101 gtcctctgac cttgacaaat tctccgcggt tgagctagtt tacctagtta
1151 gctatatgga gttcttagcc gctttacaag ccaccacctg cttttccgac
1201 accctatcag gcggcttact gacaaagacc ctagcccctg taagagcttg
1251 gattcaagaa aagaagatgc agctttgtgg cctggaagac tacgcaaagt
1301 tagtaaaagc agtggattgg cgcccagtgg acttctcttt caaggttgaa
1351 acctgggact tcagattcca tccactaggc atgtggaagg cctttcagcc
1401 cagcgaattg tcggatgtgg aagaaatgaa taatttcttc gacgatggcg
1451 acttgctaga ctgcttcaca agaatgccgg cctacgccgt caatgccgag
1501 gaagacctag ctgggatgag gggagacaac cagggagaaa cgtcaacagc
1551 ccctagggaa ccagaagggg acaagaagga gtacgtcaac ccggcagaaa
1601 ccttcctgga taagttgacg agaaaacaca accgggaaac taagagtcgt
1651 gctgcaaaga aggctaaacg tctggccgag attcaagact cgataaaccg
1701 ggaccagact gaggaagaaa gccagggagc acccaacatg ggcgaagcac
1751 caagcaacgc tgaacttccc ggaaccaatg gagcgggagc tggtaccaca
1801 ttcccgactt tggaagccct accacaaaag tgggaagatg cgtctttcac
1851 agactcatca atgactgacc aaatggaaat catgccgggg aaagaggccg
1901 tggaagttgc cacgcaaaaa gtggttgatg aactcccttg gaaacactgg
1951 ctcccccaac tgaatgcagt cggctttaag gccctagaaa tccaaagaga
2001 cagaaatggg accatgatca tgcccatcac agaaatggtt ttcgggctcg
2051 acaaagaaga atttcccgaa ggaacccctg aagcattggc ccgggaactc
2101 aaggccatga accgaagtcc aaccacgatc cctctggatt tacttagagc
2151 cagggactac gggagtgacg tcaaaaacaa gaggattgga gcaatcacca
2201 agacccaggc tgccagttgg ggtgagtacc tgactgggaa aattgaaagc
2251 ttgcctgaaa ggaaagtggc cgcttgcgtc attcatggag cgggaggatc
2301 tggcaagagt catgcgattc agaaggcgct gagggaaatt ggcaaggggt
2351 ccgacatcac tgtagtgctt ccaaccaatg agttgcgcct ggactggagc
2401 aagaaagtcc caaacacaga gccctacatg ttcaagacct atgaaaaggc
2451 cctaatcgga ggaacaggga gcatagtaat cttcgacgat tactcgaaac
2501 tgccaccagg ttacattgaa gcgctagtta gcttctccac caagattaag
2551 ctgatcattc tcactggaga tagcagacaa agcgtctacc atgagacgtc
2601 agacgacgcc tccattaggc acttgggtcc agccactgag gtatttgcga
2651 agtactgtag gtactacttg aatgccacac accgcaacaa gaaagatttg
2701 gcaaacatgt tgggtgtata cagcgagagg actggtacca ctgaaatcag
2751 catgagctct gagttcctcg aaggggtccc aacattggtg ccctcagatg
2801 agaagaggaa gttatacatg ggcaccggca gaaatgacac gttcacgtac
2851 gccggatgcc aaggtcttac aaagccaaag gttcaaattg tgttagacca
2901 caatactcag gtgtgcagcg ccaacgtcat gtacacggca ttgtctagag
2951 ccactgatag gatccacttc atcaacacca gtgccaactc atccgccttt
3001 tgggagaagc ttgacagcac cccttacctt aagactttct tgtctgttgt
3051 aagggaacaa gcccttaggg agtatgagcc tgttgaggct gaaccaataa
3101 gagagcctga accacaaact cacatgtgcg tggagaatga ggagtctgtg
3151 ctggaggaat acaaagaaga gttgctagag aagtttgaca gggagatcca
3201 ctcggaggcc catggacatt ccaactgcgt acagacggag aataccacag
3251 tacaactatt ctcccaccaa caggccaaag atgagactct tctgtgggca
3301 accattgatg cacgcttgaa gaccagcaac caagaaagca actttcggga
3351 gttcctgagt aagagagaca ttggagacgt tctctttcta aactatcaaa
3401 gagcaatggg gctacccaaa gagccaattc ctttctcaca ggaggtgtgg
3451 gaagcgtgtg cgcacgaggt gcaaagcaag tacttgagca agtctaagtg
3501 caacctcatc aatggtacag tcagacaaag tcccgacttc gatgagaata
3551 agatcatggt gttcctcaag tctcaatggg taacaaaagt tgaaaaactg
3601 ggattgccaa aaatcaaacc gggccaaacg attgccgctt tctatcaaca
3651 gacagtcatg ctctttggca caatggcccg atacatgcgt tggtttaggc
3701 aggcattcca acccaaagaa gtcttcatta actgcgagac gacgcctgag
3751 gacatgtcag catgggctct gagcaattgg aacttcacaa ggcccagcct
3801 tgcaaacgac tacacggcct tcgaccagtc gcaggacgga gccatgctac
3851 aatttgaggt gctcaaagct aagcaccact gcatcccaga ggagattata
3901 caggcgtaca ttgacatcaa aacaaatgcg cagatctttc tcggtaccct
3951 gtcgatcatg agactcactg gagagggccc aacatttgat gccaacactg
4001 agtgcaacat tgccttcaca cacaccaagt ttgacatacc cgcaggcact
4051 gctcaagtgt atgcgggtga tgactcggcg ttagactgtg ttccagaaat
4101 caagcagagc tttcacaggc ttgaagataa gttgcttctt aagtccaagc
4151 cggtcatcac ccagcagaag aaaggaagtt ggcctgaatt ttgcggatgg
4201 ttgatcacac caaaaggagt tatgaaagat cctatcaaac tacacgtgag
4251 tctgaagctc gcggaagcaa aaggggagct gaagaagtgc caggactcct
4301 acgagattga tctgagctac gcctatgacc acaaagactc tctgcatgat
4351 ctgtttgatg agaaacaatg ccaagcgcac acactaacat gcaggactct
4401 gataaagtct ggacgtggca cagtcagtct cccccgcctc agaaattttc
4451 tttaaccgtt aagttaccat ttagacttga ataagatgga tattctcatc
4501 attagtttga aaagtttagg ttactctaga actcctagac ctttagattc
4551 tggaccttta gtagtacacg ctgttgccgg tgctggaaag tctactgcac
4601 tgcgaaagtt gcttgcaaga cactcgacct tcacaataca cacccttaag
4651 atcccagaca agatcagcat tagaaccagg ggcatacaga aaccaggacc
4701 aattcccaag ggcaatttcg ccatccttga tgaatacaca ctggacgcga
4751 ccacaagaga agcttaccaa gctctctttg cagacccgta tcaggcgcca
4801 gaactcagcc ttgagcctca tttctaccta gaaacctcct tcaggacccc
4851 aaagaaagca gccgctttaa tagctagctg cggtttcgac tttgaaacca
4901 attcgcagga agaggggcat ctcgaggtta caggaatatt caagggacct
4951 ttactaggca aggtaattgt catagactca gaggcggaaa caaccctgtc
5001 tagacacgga gttgagtttg tcaagccgtg ccaggtcacg ggtctggaat
5051 tcccagtggt caccatcgtg tcagcagctc caattgagga aatcggtcag
5101 tccaccctgt tctacaacgc tatcacaaga tcaaaggggc tgacttatgt
5151 ccgcgcaggg acataggctg accgcaccgg tcaactcgga aaaagtgtac
5201 atagtcttag gtttatcgtt tgctttgatt tcaattactt tcctgctctc
5251 tagaaataat ttgccccacg tcggggacaa cattcacagc ctgccacacg
5301 gtggagccta cagggacggc acaaaggcaa tcttgtacaa ttcaccaaac
5351 ttcggctcga ggaccagtct gaacaacagc aagaacgcgg catttgcagc
5401 tgtgttactg ctgtctctgt taatatatgg aagcaggtgc ctatctcaac
5451 gcaatcatct ttgtgcttgt ggcaacaatc atagcagtaa ttagcgttgg
5501 attgacccaa acagagccgt gtaccatgag gatcactgga gaatcaatca
5551 ctgtacatgc ttgccactta gacagcgaga caatcaaggc cttggctacc
5601 ctcaaaccac tctcacttga gcggttaagt ttccaccaat aattgaaaga
5651 tgactacgcc agccaacacc actcaagctg taggatccac tacatcaact
5701 accaccacta ctgcaggcgc aactcctgct aactcagggc tgttcaccat
5751 accggatggg gacttcttca gcaccgcaaa ggccgttgtg gctagcaatg
5801 ccgttgccac caatgaagac ctaactaaga tacagaagat ctggaaggac
5851 atgaaaattc cttcggacac tatggctcaa gcagcttggg acttagtgag
5901 gcactgtgct gacgttgggt cttccgctca gactgagatg ataggcactg
5951 gcccatactc aaatggagtc agtagagcta ggttagctgc tgcaattaaa
6001 gaagtgtgca aactaaggca gttctgcagg aagtatgctc cagtcgtctg
6051 gaactggatg ctcacaaaca acagcccacc agccaattgg caagcacagg
6101 gcttcaagcc ggaacacaaa ttcgcagcct tcgacttctt tgatggagtc
6151 accaaccctg cagccatcac cccaaaagaa gggctcataa ggcctccgtc
6201 tgaggcagag atgaatgccg ctcaaactgc tgccttcgtg aagatcacta
6251 aggcgagggc acaatccaac gactttgcca gtctggatgc cgcggtcact
6301 agaggccgca tcaccggaac aaccgctgca gaggctgtta tctcactacc
6351 cccaccataa ctacgtccac ataaccgacg cgtatcccag tttcatagta
6401 ttttctggtt tgattgtatg aataatataa ata