All Known Sequences of Orthomyxoviridae

Family: Orthomyxoviridae

Genera in the Family

Influenzavirus A sequences
Influenzavirus B sequences
Influenzavirus C sequences
Isavirus sequences
Quaranjavirus sequences
Thogotovirus sequences
Unassigned Orthomyxoviridae sequences

Unassigned Viruses in the Family

Influenza A virus (FLUAV) - Influenzavirus A

AF144300 Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) polymerase (PB2) gene, complete cds.
AF144301 Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) polymerase (PB1) gene, complete cds.
AF144302 Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) polymerase (PA) gene, complete cds.
AF144303 Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) nucleocapsid protein (NP) gene, complete cds.
AF144304 Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) neuraminidase (NA) gene, complete cds.
AF144305 Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) hemagglutinin (HA) gene, complete cds.
AF144306 Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) matrix proteins M1 and M2 (M) gene, alternatively spliced products, complete cds.
AF144307 Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) nonstructural proteins NS1 and NS2 (NS) gene, alternatively spliced products, complete cds.
J02146 Influenza A/Puerto Rico/8/34(Cambridge) (H1N1), neuraminidase (seg 6 of complete genome).
J02147 Influenza A/Puerto Rico/8/34(Cambridge) (H1N1), nucleoprotein (seg 5 of complete genome).
J02150 Influenza A/Puerto Rico/8/34(Cambridge) (H1N1), nonstructural protein (seg 8 of complete genome).
J02151 Influenza A/Puerto Rico/8/34(Cambridge) (H1N1), polymerase 1 (seg 2 of complete genome).
U26830 Influenza A virus A/Beijing/32/92 hemagglutinin gene, complete cds.
U65564 Influenza A virus H3N2 strain A/Akita/1/94 M1 protein and M2 protein genes, complete cds.
U65670 Influenza A virus H3N2 strain A/Akita/1/94 nonstructural protein 1 and nonstructural protein 2 mRNAs, complete cds.
U71128 Influenza A virus H3N2 A/Akita/1/94 PB1 polymerase subunit (PB1) gene, complete cds.
U71132 Influenza A virus H3N2 A/Akita/1/94 PB2 polymerase subunit (PB2) gene, complete cds.
U71136 Influenza A virus H3N2 A/Akita/1/94 PA polymerase subunit (PA) gene, complete cds.
U71140 Influenza A virus H3N2 A/Akita/1/94 neuraminidase (NA) gene, complete cds.
U71144 Influenza A virus H3N2 A/Akita/1/94 nucleoprotein (NP) gene, complete cds.
V00603 Influenza A virus (A/PR/8/34(H1N1)) mRNA for hypothetical protein, strain A/PR/8/34
V01088 Influenza A virus (A/PR/8/34(HON1)) hemagglutinin gene
V01099 Influenza A virus ORF1 and ORF2 RNA, strain A/PR/8/34
V01106 Influenza A virus ORF1 RNA, strain A/PR/8/38

Influenza B virus (FLUBV) - Influenzavirus B

AF005737 Influenza B virus B/Panama/45/90 polymerase (PB2) mRNA, complete cds.
AF100378 Influenza B virus B/Yamagata/16/88 segment 7 M1 matrix protein (M) and BM2 protein (BM2) genes, complete cds.
AF100396 Influenza B virus B/Yamagata/16/88 segment 8 nonstructural protein (NS1) and nonstructural protein (NS2) genes, complete cds.
AF101989 Influenza B virus (B/Yamagata/16/88) polymerase (PB2) gene, complete cds.
AF102006 Influenza B virus (B/Yamagata/16/88) polymerase (PB1) gene, complete cds.
AF102023 Influenza B virus (B/Yamagata/16/88) polymerase (PA) gene, complete cds.
J02094 Influenza B/Lee/40, matrix protein (complete seg 7) RNA.
J02095 Influenza B/lee/40, neuraminidase & nb (seg 6) rna.
J02096 Influenza B/Lee/40, nonstructural protein (seg 8), RNA.
K00423 Influenza B/Lee/40, hemagglutinin (seg 4), complete segment.
K01395 Influenza B/Lee/40, nucleoprotein (seg 5), complete segment.
L49385 Influenza virus type B (isolate B/Yamagata/16/88) nucleoprotein gene, complete cds.
M14880 Influenza B/Lee/40, PB1 polymerase (seg 1) RNA, complete.
M20172 Influenza B/Ann Arbor/1/66 (wild-type) polymerase (acidic) RNA, complete cds.
X13553 Influenza B virus HA gene for haemagglutinin precursor, strain B/B/Victoria/3/85
X67013 Influenza Virus RNA for neuraminidase and NB protein

Influenza C virus (FLUCV) - Influenzavirus C

K01689 Influenza C/California/78, hemagglutinin (seg 4), cDNA.
M10087 Influenza C virus (STRAIN C/CALIFORNIA/78) segment 7 nonstructural protein gene, complete cds.
M17700 Influenza C/California/78 nucleoprotein RNA (seg 5), complete cds.
M22038 Influenza virus type C (C/JJ/50) matrix protein gene, complete cds.
M28060 Influenza C/JJ/50 polymerase 1 (PB1, segment 2) RNA, complete cds.
M28061 Influenza C/JJ/50 polymerase 2 (PB2, segment 1) RNA, complete cds.
M28062 Influenza C/JJ/50 polymerase 3 (P3, segment 3) RNA, complete cds.
U20228 Influenza C virus polymerase 2 gene, complete cds.

Infectious salmon anemia virus (ISAV) - Isavirus

AF306548 Infectious salmon anemia virus putative polymerase mRNA, complete cds.
AF312316 Infectious salmon anemia virus isolate RPC/NB-877 NS2 and NS1 genes, complete cds.
AF404340 Infectious salmon anemia virus segment 8 P6 and P7 genes, complete cds.
AF404341 Infectious salmon anemia virus segment 7 P4 and P5 genes, complete cds.
AF404342 Infectious salmon anemia virus segment 6 putative HA protein (HA) gene, complete cds.
AF404343 Infectious salmon anemia virus segment 5 putative acetylesterase (P3) gene, complete cds.
AF404344 Infectious salmon anemia virus segment 4 putative PA protein (P2) gene, complete cds.
AF404345 Infectious salmon anemia virus segment 3 putative nucleocapsid protein (NP) gene, complete cds.
AF404346 Infectious salmon anemia virus segment 2 putative PB1 protein (PB1) gene, complete cds.
AJ002475 Infectious salmon anemia virus genomic RNA for putative polymerase (PB1) protein
AJ276858 Infectious salmon anemia virus (ISAV) NP gene for nucleoprotein, genomic RNA, isolate 390/98
AJ276859 Infectious salmon anemia virus mRNA for haemagglutinin protein (HA gene), isolate 390/98
AJ277461 Infectious salmon anemia virus ORF for hypothetical protein, genomic RNA, isolate 390/98
AY044132 Infectious salmon anemia virus segment 7, complete sequence.
AY168787 Infectious salmon anemia virus isolate Bremnes 98 segment 1, complete sequence.

Quaranfil virus (QRFV) - Quaranjavirus

FJ861694 Quaranfil virus isolate EG T 377 hemagglutinin (HA) gene, complete cds.
FJ861695 Quaranfil virus isolate EG T 377 polymerase PB1 (PB1) gene, complete cds.
GQ499302 Quaranfil virus isolate EG T 377 polymerase PB2 (PB2) gene, complete cds.
GQ499303 Quaranfil virus isolate EG T 377 polymerase PA (PA) gene, complete cds.
GQ499304 Quaranfil virus isolate EG T 377 unknown gene.
JN412853 Quaranfil virus isolate EG T 377 hypothetical protein gene, complete cds.

Johnston Atoll Virus - Quaranjavirus

None reported

Dhori virus (DHOV) - Thogotovirus

None reported

Thogoto virus (THOV) - Thogotovirus

AF004985 Thogoto virus segment 2 PB1 protein mRNA, complete cds.
AF006073 Thogoto virus segment 3 PA polymerase subunit mRNA, complete cds.
AF527531 Thogoto virus strain SiAr126 segment 6, complete sequence.
M77280 Thogoto virus (Orthomyxovirus) glycoprotein 75 (segment 4) RNA, complete cds.
X96872 Thogoto virus genomic RNA for nucleoprotein
Y17873 Thogoto virus genomic RNA for PB2 polymerase subunit

Lake Chad virus - Unassigned Orthomyxoviridae

None reported