All Known Sequences of Flavivirus

Type member: Yellow fever virus

Bukalasa bat virus (BBV) - Flavivirus

None reported

Cacipacore virus (CPCV) - Flavivirus

None reported

Carey Island virus (CIV) - Flavivirus

None reported

Cowbone Ridge virus (CRV) - Flavivirus

None reported

Dakar bat virus (DBV) - Flavivirus

None reported

Israel turkey meningoencephalomyelitis virus (ITV) - Flavivirus

None reported

Jutiapa virus (JUTV) - Flavivirus

None reported

Nakiwogo virus - Flavivirus

None reported

Ngoye virus - Flavivirus

None reported

Phnom Penh bat virus (PPBV) - Flavivirus

None reported

Sal Vieja virus (SVV) - Flavivirus

None reported

San Perlita virus (SPV) - Flavivirus

None reported

Yokose virus (YOKV) - Flavivirus

AB114858 Yokose virus genomic RNA, complete genome, strain:Oita 36.

Culex flavivirus - Flavivirus

AB262759 Culex flavivirus genomic RNA, complete genome, strain: Tokyo.

Unnamed Aedes flavivirus - Flavivirus

AB488408 Aedes flavivirus genomic RNA, complete genome, strain: Narita-21.

Japanese encephalitis virus (JEV) - Flavivirus

AF075723 Japanese encephalitis virus strain GP78, complete genome.
M18370 Japanese encephalitis virus (strain JaOArS982), complete genome.

Yellow fever virus (YFV) - Flavivirus

AF094612 Yellow fever virus strain Trinidad 79A isolate 788379, complete genome.
X03700 Yellow fever virus complete genome, 17D vaccine strain

Rio Bravo virus (RBV) - Flavivirus

AF144692 Rio Bravo virus strain RiMAR polyprotein gene, complete cds.

Apoi virus (APOIV) - Flavivirus

AF160193 Apoi virus polyprotein gene, complete cds.

Murray Valley encephalitis virus (MVEV) - Flavivirus

AF161266 Murray Valley encephalitis virus strain MVE-1-51, complete genome.

Dengue virus (DENV) - Flavivirus

AF180818 Dengue virus type 1 strain 16007 (PDK-13) polyprotein precursor, mRNA, complete cds.
M14931 Dengue virus type 4 polyprotein precursor, gene, complete cds.
M19197 Dengue virus type 2 (S1 vaccine strain), complete genome.
M93130 Dengue type 3 virus complete genome RNA, complete cds.
U88536 Dengue virus type 1 clone 45AZ5, complete genome.

West Nile virus (WNV) - Flavivirus

AF206518 West Nile virus isolate 2741, complete genome.
M12294 West Nile virus RNA, complete genome.

Langat virus (LGTV) - Flavivirus

AF253419 Langat virus strain TP21 polyprotein gene, complete cds.

Tamana bat virus (TABV) - Flavivirus

AF285080 Tamana bat virus polyprotein gene, complete cds.

Deer tick virus - Flavivirus

AF311056 Deer tick virus strain ctb30 polyprotein gene, complete cds.

Alkhurma virus - Flavivirus

AF331718 Alkhurma virus strain 1176 polyprotein gene, complete cds.

Modoc virus (MODV) - Flavivirus

AJ242984 Modoc virus genomic RNA for polyprotein gene

Montana myotis leukoencephalitis virus (MMLV) - Flavivirus

AJ299445 Montana myotis leukoencephalitis virus complete genomic RNA

Kamiti River virus - Flavivirus

AY149905 Kamiti River virus isolate SR-82 polyprotein precursor, gene, complete cds.

Omsk hemorrhagic fever virus (OHFV) - Flavivirus

AY193805 Omsk hemorrhagic fever virus strain Bogoluvovska, complete genome.

Kyasanur Forest disease virus (KFDV) - Flavivirus

None reported

Usutu virus (USUV) - Flavivirus

AY453411 Usutu virus strain Vienna 2001 from Austria, complete genome.

Zika virus (ZIKV) - Flavivirus

AY632535 Zika virus strain MR 766, complete genome.

Aroa virus (AROAV) - Flavivirus

AY632536 Bussuquara virus strain BeAn 4073, complete genome.
AY632538 Iguape virus strain SPAn 71686, complete genome.

Entebbe bat virus (ENTV) - Flavivirus

AY632537 Entebbe bat virus polyprotein gene, complete cds.

Ilheus virus (ILHV) - Flavivirus

AY632539 Ilheus virus strain Original, complete genome.
AY632542 Rocio virus strain SPH 34675, complete genome.

Kedougou virus (KEDV) - Flavivirus

AY632540 Kedougou virus strain DakAar D1470, complete genome.

Kokobera virus (KOKV) - Flavivirus

AY632541 Kokobera virus strain AusMRM 32, complete genome.

Sepik virus (SEPV) - Flavivirus

AY632543 Sepik virus polyprotein gene, complete cds.

St. Louis encephalitis virus (SLEV) - Flavivirus

AY632544 St. Louis encephalitis virus polyprotein gene, complete cds.

Bagaza virus (BAGV) - Flavivirus

AY632545 Bagaza virus strain DakAr B209, complete genome.

Royal Farm virus (RFV) - Flavivirus

AY863002 Karshi virus strain LEIV 2247, complete genome.

Meaban virus (MEAV) - Flavivirus

DQ235144 Meaban virus from France polyprotein gene, complete cds.

Gadgets Gully virus (GGYV) - Flavivirus

DQ235145 Gadgets Gully virus from Australia polyprotein gene, complete cds.

Kadam virus (KADV) - Flavivirus

DQ235146 Kadam virus from Uganda polyprotein gene, complete cds.

Karshi virus - Flavivirus

DQ235147 Karshi virus from Uzbekistan polyprotein gene, complete cds.

Tyuleniy virus (TYUV) - Flavivirus

DQ235148 Tyuleniy virus from USA polyprotein gene, complete cds.

Saumarez Reef virus (SREV) - Flavivirus

DQ235150 Saumarez Reef virus from Australia polyprotein gene, complete cds.

Banzi virus (BANV) - Flavivirus

DQ859056 Banzi virus strain SAH 336 polyprotein gene, complete cds.

Bouboui virus (BOUV) - Flavivirus

DQ859057 Bouboui virus strain DAK AR B490 polyprotein gene, complete cds.

Edge Hill virus (EHV) - Flavivirus

DQ859060 Edge Hill virus strain YMP 48 polyprotein gene, complete cds.

Saboya virus (SABV) - Flavivirus

DQ859062 Saboya virus strain Dak AR D4600 polyprotein gene, complete cds.

Spondweni virus - Flavivirus

DQ859064 Spondweni virus strain SM-6 V-1 polyprotein gene, complete cds.

Uganda S virus (UGSV) - Flavivirus

DQ859065 Uganda S virus polyprotein gene, complete cds.

Jugra virus (JUGV) - Flavivirus

DQ859066 Jugra virus strain P-9-314 polyprotein gene, complete cds.

Yaounde virus (YAOV) - Flavivirus

EU082199 Yaounde virus strain Dak Ar Y276 polyprotein gene, complete cds.

Koutango virus (KOUV) - Flavivirus

EU082200 Koutango virus strain Dak Ar D 5443 polyprotein gene, complete cds.

Nounane virus - Flavivirus

EU159426 Nounane virus polyprotein mRNA, complete cds.
FJ711167 Nounane virus isolate B31 polyprotein mRNA, complete cds.

Wesselsbron virus (WESSV) - Flavivirus

EU707555 Wesselsbron virus strain SAH177, complete genome.

Lammi virus - Flavivirus

FJ606789 Lammi virus polyprotein gene, complete cds.

Quang Binh virus - Flavivirus

FJ644291 Quang Binh virus isolate VN180, complete genome.

Chaoyang virus - Flavivirus

FJ883471 Chaoyang virus strain Deming polyprotein gene, complete cds.
JQ308185 Chaoyang virus isolate HLD115, complete genome.

Baiyangdian virus - Flavivirus

JF312912 Baiyangdian Virus strain BYD-1 polyprotein gene, complete cds.

Tembusu virus (TMUV) - Flavivirus

JF895923 Tembusu virus strain JS804, complete genome.

Donggang virus - Flavivirus

JQ086551 Donggang virus isolate DG0909, complete genome.

Hanko virus - Flavivirus

JQ268258 Hanko virus polyprotein gene, complete cds.

Duck flavivirus - Flavivirus

JQ289550 Duck flavivirus TA, complete genome.

Duck egg-drop syndrome virus - Flavivirus

JQ920420 Duck egg-drop syndrome virus strain byd1, complete genome.

Ntaya virus (NTAV) - Flavivirus

JX236040 Ntaya virus isolate IPDIA, complete genome.

Sitiawan virus - Flavivirus

JX477686 Sitiawan virus, complete genome.

Mosquito flavivirus - Flavivirus

KC464457 Mosquito flavivirus isolate LSFlaviV-A20-09, complete genome.

Palm Creek virus - Flavivirus

KC505248 Palm Creek virus isolate 56 polyprotein gene, complete cds.

New Mapoon virus - Flavivirus

KC788512 New Mapoon virus strain CY1014 polyprotein gene, complete cds.

Powassan virus (POWV) - Flavivirus

L06436 Powassan virus, complete genome.

Cell fusing agent virus (CFAV) - Flavivirus

M91671 Flavivirus cell fusing agent polyprotein gene, complete cds.

Tick-borne encephalitis virus (TBEV) - Flavivirus

U27495 Tick-borne encephalitis virus Neudoerfl polyprotein, complete cds.

Louping ill virus (LIV) - Flavivirus

Y07863 Louping ill virus, complete genome