Curated Sequences of Caulimoviridae

Family: Caulimoviridae

Genera in the Family

• Badnavirus curated sequences
• Caulimovirus curated sequences
• Cavemovirus curated sequences
• Petuvirus curated sequences
• Solendovirus curated sequences
• Soymovirus curated sequences
• Tungrovirus curated sequences
• Unassigned Caulimoviridae curated sequences

Unassigned Viruses in the Family

Fig badnavirus 1

• JF411989 Complete sequence, isolate Arkansas 1
• JN050858 ORF2, US isolate CA 10
• JN050859 ORF2, US isolate CA 11
• JN050860 ORF2, US isolate CA 12
• JN050861 ORF2, US isolate CA 13
• JN050862 ORF2, US isolate CA 14
• JN050863 ORF2, US isolate CA 15
• JN050864 ORF2, US isolate CA 16
• JN050865 ORF2, US isolate CA 17
• JN050866 ORF2, US isolate CA 18
• JN050867 ORF2, US isolate CA 19
• JN050868 ORF2, US isolate CA 21
• JN050869 ORF2, US isolate CA 22
• JN050870 ORF2, US isolate CA 23
• JN050871 ORF2, US isolate CA 25
• JN050872 ORF2, US isolate CA 26
• JN050873 ORF2, US isolate CA 27
• JN050874 ORF2, US isolate CA 28
• JN050875 ORF2, US isolate CA 30
• JN050876 ORF2, US isolate CA 31
• JN050877 ORF2, US isolate CA 32
• JN050878 ORF2, US isolate CA 33
• JN050879 ORF2, US isolate CA 34
• JN050880 ORF2, US isolate CA 35
• JN050881 ORF2, US isolate CA 36
• JN050882 ORF2, US isolate CA 37
• JN050883 ORF2, US isolate CA 38
• JN050884 ORF2, US isolate CA 39
• JN112365 ORF2, US isolate AR2
• JN112366 ORF2, US isolate AR3
• JN112367 ORF2, US isolate AR4
• JN112368 ORF2, US isolate AR5
• JN112369 ORF2, US isolate AR6
• JQ282668 ORF2, US isolate OH1
• JQ282669 ORF2, US isolate OR1
• JQ282670 ORF2, US isolate OR2
• JQ282671 ORF2, US isolate OR3
• JQ282672 ORF2, US isolate SC1
• JQ282673 ORF2, US isolate MI1
• JQ282674 ORF2, US isolate FL1
• JQ282675 ORF2, US isolate CA41
• JQ282676 ORF2, US isolate CA42
• JQ282677 ORF2, US isolate FS3
• JQ282678 ORF2, US isolate FS4

Canna streak virus

None reported

Banana streak virus (BSV)

• DQ092436 Complete sequence, Chinese Acuminata Yunnan strain
• JQ409539 Complete sequence, Indian isolate Trichy1
• JQ409540 Complete sequence, Indian isolate Pune

Dracaena mottle virus

• DQ473478 Complete sequence, Chinese isolate
• EF494181 Complete sequence, Chinese Lucky bamboo bacilliform virus

Mulberry badnavirus 1

None reported

Banana streak CA virus

• HQ593111 Complete sequence, Kenyan isolate

Banana streak GF virus (BSGFV)

• AY493509 Complete sequence, Ecuador isolate

Banana streak IM virus

• HQ593112 Complete sequence, Kenyan isolate
• HQ659760 Complete sequence, Australian strain IRFA910

Banana streak MY virus (BSMysV)

• AY805074 Complete sequence, Australian isolate
• EU140339 Complete sequence, Indian isolate TRY

Banana streak OL virus (BSOLV)

• AJ002234 Complete sequence, Nigerian isolate
• DQ451009 Complete sequence, isolate GD
• DQ859899 Complete sequence, Indian isolate TRY

Banana streak UA virus

• HQ593107 Complete sequence, Kenyan isolate

Banana streak UI virus

• HQ593108 Complete sequence, Ugandan isolate

Banana streak UL virus

• HQ593109 Complete sequence, Ugandan isolate

Banana streak UM virus

• HQ593110 Complete sequence, Ugandan isolate

Banana streak VN virus (BSVNV)

• AY750155 Complete sequence, Vietnam acuminata strain

Rubus yellow net virus (RYNV)

None reported

Taro bacilliform virus (TaBV)

• AF357836 Complete sequence, Papua New Guinea

Yucca bacilliform virus (YBV)

None reported

Aucuba bacilliform virus (AuBV)

None reported

Mimosa bacilliform virus (MBV)

None reported

Sweetpotato badnavirus B

• FJ560944 Complete sequence, Peruvian isolate Huachano1

Sweetpotato badnavirus C

None reported

Cacao swollen shoot virus (CSSV)

• AJ534983 Complete sequence, Togo Nyongbo isolate
• AJ608931 Complete sequence, Ghana New Juaben isolate
• AJ609019 Complete sequence, Ghana Peki isolate
• AJ609020 Complete sequence, Ghana N1A isolate
• AJ781003 Complete sequence, Togo Wobe12 isolate
• JN606110 Complete sequence, Cote d'Ivoire isolate CI152-09
• L14546 Complete sequence, Hagen et al., 1993

Canna yellow mottle virus (CaYMV)

None reported

Cycad leaf necrosis virus

• EU853709 Complete sequence, USA isolate

Piper yellow mottle virus (PYMoV)

None reported

Schefflera ringspot virus (SRV)

None reported

Citrus yellow mosaic virus (CiYMV)

• AF347695 Complete sequence, infectious clone
• DQ875213 Complete sequence, Indian Tirupati isolate
• EU489744 Complete sequence, isolate AL
• EU489745 Complete sequence, isolate PM
• EU708316 Complete sequence, Indian sweet orange isolate SOP
• EU708317 Complete sequence, Indian acid lime isolate
• EU884191 Complete sequence, Indian Tirupati Rangpur lime isolate
• FJ617224 Complete sequence, Indian Nagri isolate
• JN006805 Complete sequence, Indian isolate SO JNTU
• JN006806 Complete sequence, Indian isolate ROL

Sweet potato pakakuy virus (SPPaV)

• FJ560943 Complete sequence, Peruvian isolate Huachano1

Aglaonema bacilliform virus (ABV)

None reported

Pineapple bacilliform virus (PBV)

None reported

Sugarcane bacilliform virus (SCBV)

• EF635928 1.9kb including complete ORF2, Indian isolate CB91 clone 1
• EF635929 1.9kb including complete ORF2, Indian isolate CB91 clone 2
• FJ439817 Complete sequence, Guadeloupe isolate BataviaD
• FJ824813 Complete sequence, Guadeloupe clone 1
• FJ824814 Complete sequence, Guadeloupe clone 10
• JN377533 Complete sequence, Indian Coimbatore isolate BO91
• JN377534 Complete sequence, Indian Coimbatore isolate Iscam
• JN377535 Complete sequence, Indian Coimbatore isolate BB
• JN377536 Complete sequence, Indian Coimbatore isolate BT
• JN377537 Complete sequence, Indian Coimbatore isolate BRU

Kalanchoe top-spotting virus (KTSV)

• AY180137 Complete sequence

Unnamed grapevine badnavirus

None reported

Ambrosia asymptomatic virus 2

None reported

Ambrosia asymptomatic virus 4

None reported

Banana streak Cavendish virus

None reported

Commelina yellow mottle virus (ComYMV)

• X52938 Complete sequence

Dioscorea bacilliform ? virus

None reported

Grapevine vein clearing virus

• JF301669 Complete sequence, isolate LBC0903

Turmeric mild chlorosis virus

None reported

Dioscorea bacilliform AL virus (DBALV)

• X94575 ORF1, ORF2 and truncated ORF3, clone L85-36
• X94576 ORF1, ORF2 and truncated ORF3, clone L85-20

Dioscorea bacilliform SN virus (DBSNV)

• DQ822073 Complete sequence, Benin clone B39-4
• DQ822074 Complete sequence, Benin clone B39-6

Pelargonium vein banding virus

• GQ428155 Complete sequence, US isolate

Pineapple bacilliform CO virus (PBCOV)

• GQ395793 RTAse, RNaseH and zinc finger comains, isolate HI1 variant a
• GQ395794 ORF2, isolate HI2
• GQ398110 Complete sequence, isolate HI1
• GU121676 Complete sequence, Chinese isolate

Pineapple bacilliform ER virus (PBERV)

None reported

Spiraea yellow leaf spot virus (SYLSV)

None reported

Sugarcane bacilliform IM virus (SCBIMV)

• AJ277091 Complete sequence, Australian Ireng Maleng isolate

Sugarcane bacilliform MO virus (SCBMorV)

• M89923 Complete sequence, Moroccan isolate

Stilbocarpa mosaic bacilliform virus (SMBV)

None reported

Gooseberry vein banding associated virus (GVBAV)

• HQ852248 Complete sequence, UK isolate GB1
• HQ852249 Complete sequence, Netherlands isolate RC
• HQ852250 Complete sequence, Canadian isolate BC
• HQ852251 Complete sequence, UK isolate RIB9001
• JQ316114 Complete sequence, Czech isolate RC HC

Bougainvillea chlorotic vein banding virus (BCVBV)

• EU034539 Complete sequence, Taiwan isolate

Plantago virus 4 (PlV-4)

None reported

Dahlia mosaic virus (DMV)

• AY291585 Movement protein ORF1
• AY291586 Helper protein ORF2
• AY291587 Minor capsid protein ORF3
• AY291588 Coat protein ORF4
• AY309479 Reverse transcriptase ORF5
• AY309480 Inclusion body protein ORF6
• EU090952 Movement protein ORF1, USA isolate
• EU090953 Helper protein ORF2, USA isolate
• EU090954 Minor capsid protein ORF3, USA isolate
• EU090955 Coat protein ORF4, USA isolate
• EU090956 Reverse transcriptase ORF5, USA isolate
• EU090957 Inclusion body protein ORF6, USA isolate
• EU096520 Movement protein ORF1, USA isolate D10
• EU096521 Minor capsid protein ORF3, USA isolate D10
• EU096522 Truncated coat protein ORF4 and reverse transcriptase ORF5, USA isolate D10
• EU096523 Inclusion body protein ORF6, USA isolate D10
• HQ261756 Movement protein ORF1, Mexican isolate D10 from D. coccinea
• HQ261757 Minor capsid protein ORF3, Mexican isolate D10 from D. coccinea
• HQ261758 Reverse transcriptase ORF5, Mexican isolate D10 from D. coccinea
• HQ261759 Inclusion body protein ORF6, Mexican isolate D10 from D. coccinea
• HQ336476 Movement protein ORF1, Mexican isolate D10 from D. sherffii
• HQ336477 Minor capsid protein ORF3, Mexican isolate D10 from D. sherffii
• HQ336478 Reverse transcriptase ORF5, Mexican isolate D10 from D. sherffii
• HQ336479 Inclusion body protein ORF6, Mexican isolate D10 from D. sherffii
• HQ416675 Movement protein ORF1, Mexican isolate D10 from D. tenuicaulis
• HQ416676 Minor capsid protein ORF3, Mexican isolate D10 from D. tenuicaulis
• HQ416677 Reverse transcriptase ORF5, Mexican isolate D10 from D. tenuicaulis
• HQ416678 Inclusion body protein ORF6, Mexican isolate D10 from D. tenuicaulis
• JX272320 Complete sequence, US Portland OR isolate

Figwort mosaic virus (FMV)

• M59930 Inclusion body protein ORF6, isolate x4
• X06166 Complete sequence

Sonchus mottle virus (SMoV)

None reported

Thistle mottle virus (ThMoV)

None reported

Mirabilis mosaic virus (MiMV)

• AF454635 Complete sequence

Cauliflower mosaic virus (CaMV)

• AF140604 Complete sequence, Xinjiang isolate
• AY703456 Helper protein ORF2, Iran Esfaham isolate CaME1
• D00335 Inclusion body protein ORF6, Bari 1 isolate
• DQ119036 Helper protein ORF2, Iranian isolate Ca-COr1
• DQ119037 Helper protein ORF2, Iranian isolate Ca-RE4
• DQ119038 Helper protein ORF2, Iranian isolate Ca-CQ1
• DQ119039 Helper protein ORF2, Iranian isolate Ca-CSh1
• DQ119040 Inclusion body protein ORF6 slightly incomplete, Iranian isolate Ca-CSh1
• DQ119041 Inclusion body protein ORF6 slightly incomplete, Iranian isolate Ca-CE1
• DQ211685 Inclusion body protein ORF6, UK isolate Cabb B-JI
• HE985184 Helper protein ORF2, Iranian isolate CaMV-Msh8
• HE985185 Helper protein ORF2, Iranian isolate CaMV-Toh16
• HE985186 Helper protein ORF2, Iranian isolate CaMV-Gho31
• HE985187 Helper protein ORF2, Iranian isolate CaMV-Boj35
• HE985188 Helper protein ORF2, Iranian isolate CaMV-Or37
• HE985189 Helper protein ORF2, Iranian isolate CaMV-Turnip2
• JF809616 Complete sequence, Argentinian isolate W260
• L09053 Inclusion body protein ORF6, isolate W260
• M10376 Complete sequence, altered virulence isolate D/H
• M17415 Movement protein ORF1, aphid nontransmissible Campbell isolate
• M23620 Inclusion body protein ORF6, Daubert & Routh, 1990
• M37581 Helper protein ORF2, strain PV147
• M37582 Helper protein ORF2, strain MC1841
• M90541 Complete sequence, NY8153 isolate
• M90542 Complete sequence, BBC isolate
• M90543 Complete sequence, CMV-1 isolate
• M94887 ORF7 and movement protein ORF1, isolate W260
• V00140 Complete sequence, Gardner et al., 1981, infectious clone
• V00141 Complete sequence, Franck et al., 1980
• X02606 ORF7 and movement protein ORF1, isolate CM4184
• X14911 Inclusion body protein ORF6, Japanese S strain
• X53860 Inclusion body protein ORF6, strain PV147
• X79465 Complete sequence, B29 isolate

Horseradish latent virus (HrLV)

• JX429923 Complete sequence, Danish isolate ID1

Dahlia common mosaic virus (DCMV)

• JN032736 Complete sequence, New Zealand isolate NZ

Carnation etched ring virus (CERV)

• AJ830017 Helper protein, ORF2, Indian Himachal Pradesh isolate
• AJ830018 ORF3, Indian Himachal Pradesh isolate
• AJ844550 Movement protein ORF1, Palampur isolate
• AJ844551 Movement protein ORF1, Solan isolate In-2
• AJ853858 Complete sequence, Indian isolate
• X04658 Complete sequence

Lamium leaf distortion virus (LLDV)

• EU554423 Complete sequence, USA isolate

Strawberry vein banding virus (SVBV)

• AY605662 Coat protein almost complete, USA isolate 9093.001
• AY605663 Coat protein almost complete, USA isolate 9010.001
• AY605664 Coat protein almost complete, USA isolate 9044.001
• FM867860 Coat protein, Chinese isolate
• FM999726 Inclusion body protein ORF6, Chinese isolate
• FN689701 Movement protein ORF1, Chinese Anhui isolate
• HE681085 Complete sequence, Chinese isolate
• X97304 Complete sequence

Eupatorium vein clearing virus (EVCV)

• EU569831 Complete sequence, USA isolate

Aquilegia necrotic mosaic virus (ANMV)

None reported

Rudbeckia flower distortion virus (RuFDV)

• FJ493469 Complete sequence, Minnesota isolate

Soybean mild mottle pararetrovirus

• JQ926983 Complete sequence, US isolate

Cassava vein mosaic virus (CsVMV)

• U20341 Complete sequence, Calvert et al., 1995
• U59751 Complete sequence, de Kochko et al., 1996

Sweet potato collusive virus (SPCoV)

• HQ694978 Complete sequence, Madeira isolate Mad1

Petunia vein clearing virus (PVCV)

• AY228106 Chromosomal proviral sequence from petunia
• U95208 Complete sequence

Tobacco vein clearing virus (TVCV)

• AF190123 Complete sequence

Sweet potato vein clearing virus (SPVCV)

• HQ694979 Complete sequence, Dominican Republic isolate Dom1

Blueberry red ringspot virus (BRRV)

• AF404509 Complete sequence
• HM159264 Complete sequence, Czech Republic isolate Darrow 5
• JF303673 ORF6 transcriptional activator, Polish isolate 03
• JF303675 ORF6 transcriptional activator, Polish isolate 13
• JF303679 ORF6 transcriptional activator, Polish isolate 20
• JF421559 Complete sequence, Slovenian isolate Coville 546
• JF920968 ORF1 movement protein, Polish isolate BRRSV03
• JF920969 ORF1 movement protein, Polish isolate BRRSV13
• JF920970 ORF1 movement protein, Polish isolate BRRSV16
• JF920971 ORF1 movement protein, Polish isolate BRRSV20
• JF920972 ORF5 reverse transcriptase, Polish isolate BRRSV13
• JN205460 Complete sequence, Polish isolate BRRSV24
• JQ236640 Movement protein ORF1, Polish isolate PDR-A
• JQ236641 Movement protein ORF1, Polish isolate PDR-B
• JQ236642 Movement protein ORF1, Polish isolate PDR-C
• JQ236643 Movement protein ORF1, Polish isolate PDR-E
• JQ236644 Movement protein ORF1, Polish isolate PDR-F
• JQ236645 Movement protein ORF1, Polish isolate PDR-I
• JQ236646 Movement protein ORF1, Polish isolate PDR-22
• JQ236647 Movement protein ORF1, Polish isolate BRRSV15
• JQ236648 Movement protein ORF1, Polish isolate PDR-11

Cranberry red ringspot virus

None reported

Peanut chlorotic streak virus (PCSV)

• U13988 Complete sequence, isolate K1

Soybean chlorotic mottle virus (SbCMV)

• X15828 Complete sequence

Cestrum yellow leaf curling virus (CmYLCV)

• AF364175 Complete sequence

Rice tungro bacilliform virus (RTBV)

• AF076470 Complete sequence, Serdang isolate
• AF094568 ORF1 probably complete, Thailand TB isolate
• AF094569 ORF2, Thailand TB isolate
• AF094570 Polyprotein ORF3 incomplete including the coat protein, Thailand TB isolate
• AF094571 ORF1 probably complete, Thailand T10 isolate
• AF094572 ORF2, Thailand T10 isolate
• AF094573 Polyprotein ORF3 incomplete including the coat protein, Thailand T10 isolate
• AF113830 Complete sequence, isolate G1
• AF113831 Complete sequence, isolate G2
• AF113832 Complete sequence, isolate Ic
• AF220561 Complete sequence, Thailand Chainat isolate
• AF484121 ORF1 almost complete, Indian Dhaniakhali isolate
• AJ292232 Complete sequence, Indian isolate
• AJ314596 Complete sequence, West Bengal isolate
• AM087225 Polyprotein ORF3 incomplete including the coat protein and protease, Indian Orissa isolate
• D10774 Complete sequence, Kano et al., 1992
• FN377814 Complete sequence, West Bengal Chinsura isolate
• HM149531 ORF4, Indian Puducherry isolate
• HM149532 ORF4, Indian Cuttack isolate
• HQ385226 Complete sequence, Indian Kanyakumari isolate
• JN836950 ORF1 almost complete, Indian Cuttack isolate
• JN836951 ORF2, Indian Cuttack isolate
• JN836952 ORF1 almost complete, Indian Andhra Pradesh isolate
• JN836953 ORF2, Indian Andhra Pradesh isolate
• JN836954 ORF1 almost complete, Indian Puducherry isolate
• JN836955 ORF2, Indian Puducherry isolate
• JN836956 ORF4 almost complete, Indian Andhra Pradesh isolate
• JX255736 Complete sequence, Punjab isolate
• M65026 Complete sequence, Qu et al., 1991
• X57924 Complete sequence, Philippine isolate

Piper DNA virus 1

None reported

Piper DNA virus 2

None reported

Rose yellow vein virus

• JX028536 Complete sequence, US isolate MN1

Red clover bacilliform virus

None reported